Clone FMO04506 Report

Search the DGRC for FMO04506

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:45
Well:6
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG3604-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04506.5prime Sequence

448 bp (448 high quality bases) assembled on 2008-08-04

> FMO04506.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGTGCTTTAGATATA
GCTTCAGTTTCATAGTATTCGCGGCTGTTCTGCTCCTGGCAGCCGGAATT
CGTGCAGCTCCCTCGGATGTCGTCGTGGAGAAGGCGGAGGAGCCCGCGGT
GGCCAAACCCCTGCCTGATGCCAGTGAGCTCACTGTTCCGGAGGACTGTC
ATCAGCCCAAGGAAACCGGTCGCTGTTTCGCTCTGTTCTATCGCTACGCC
TACAACGTGGATACACAATCCTGCGAGGAGTTCGTTTACGGTGGATGTGC
CGGCAACAAGAACAACTTCGAATCCAAGGAGCAGTGCGAACAGGCATGTT
TGGTAAAGTCTGCGGTTTCCTCCACGGACTCAACAACCGAACAAAACAGC
GAAGTGGCCACAGAAACTAGCACCTCGTCTGCAAGCTTTCTAGACCAT

FMO04506.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG3604-RB 631 CG3604-RB 97..497 30..430 1990 99.8 Plus
CG3604-RA 571 CG3604-RA 37..437 30..430 1990 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3697376..3697776 430..30 1990 99.8 Minus
Blast to na_te.dros performed on 2014-11-28 18:43:17 has no hits.

FMO04506.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:29 Download gff for FMO04506.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3604-RA 37..440 30..434 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:57:55 Download gff for FMO04506.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3604-RA 2..405 30..434 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:17 Download gff for FMO04506.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3604-RA 37..440 30..434 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:17 Download gff for FMO04506.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 3697378..3697776 30..428 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:29 Download gff for FMO04506.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3697378..3697776 30..428 99   Minus