FMO04508.5prime Sequence
353 bp (353 high quality bases) assembled on 2008-08-04
> FMO04508.5prime
CTTCGTATAGCATACATTTTACGAAGTTATCAGTCGACATGCATACTACA
GCAGTTGTGACCCTATTTTCTGTCCTGCTTGTGGTCTTGGTGGCTGGACA
AAATCGGAACTGCGACGAGTTGACCCGGAGATGTGAACGCTGTGTGGAAA
CATTGAATAATGCAGCTGATCGTAACCTGCCCGTCCTCAATCAAGAGTGC
AGAACTAAGACTCGGAACAATTGGCGTTGGAGGAATGTAGGACGTTGTGA
GCTGACCAGGCTGAACTGCTTGGGTTCTAATCGACGCATGAACTGTAATG
ATATTGCTGAACTCGCTGGCATGGATCGTATTAATGCAAGCTTTCTAGAC
CAT
FMO04508.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eig71Ed-RA | 415 | CG7350-RA | 62..358 | 39..335 | 1485 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15652700..15652903 | 72..275 | 1020 | 100 | Plus |
| 3L | 28110227 | 3L | 15652977..15653039 | 273..335 | 315 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:01:30 has no hits.
FMO04508.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:40 Download gff for
FMO04508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ed-RA | 62..361 | 39..339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 11:01:04 Download gff for
FMO04508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ed-RA | 55..354 | 39..339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:15 Download gff for
FMO04508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eig71Ed-RA | 62..361 | 39..339 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:15 Download gff for
FMO04508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15652600..15652631 | 41..72 | 100 | -> | Plus |
| 3L | 15652701..15652901 | 73..273 | 100 | -> | Plus |
| 3L | 15652978..15653042 | 274..339 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:40 Download gff for
FMO04508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15645700..15645731 | 41..72 | 100 | -> | Plus |
| arm_3L | 15645801..15646001 | 73..273 | 100 | -> | Plus |
| arm_3L | 15646078..15646142 | 274..339 | 96 | | Plus |
