FMO04511.5prime Sequence
1196 bp (1045 high quality bases) assembled on 2008-08-04
> FMO04511.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTGTCACAGAAT
TTACGCCTCGTCCGGGGATTGCTTAATTACGGAGTTTGCCGCCCGAGCTT
GAGAAACTTCGCAGCCGTTGGCGATAAAAACAACGCAGCCGATAATGCTA
ATGCCAGCGATGTGGACGAACGCCACCCGCTGCATGGTATCCGGATTTTG
GACCTATCGCGCATCATCGCCGGCCCCTATTGCACCATGGTTCTGGCGGA
TCTCGGCGCGGAAGTTATCAAGGTGGAGCGTCCACACTTTGGCGATGAGG
CGCGTAAGTGGGGACCACCCTTTCTAAAGAACAGCAACGATGCCGCCTAC
TTCCTGGCTCCCAATCGCAATAAACGGAGCATCTGCATCGATATCAAGCG
CGGCACGCAACTCCTTCATCGCCTGGCCGAGATTAGCGACGTGCTGGTGG
AGAATTATGTGCCCGGCACCTTGGAGCGTTACGGCCTGGGCTACGAGCAG
TTGCGTAAGGTGAATCCCAAACTGATCTATTGCTCAATGACGGGTTATGG
CTCTGTGGGACCGTATGCCAAGCGACCCGGCTACGATGTGATTGCCTCCT
CGGTTGGAGGACTGATGCACATCACCGGCGAGCGGGATGGACCGCCCAGC
AAGGTGGGCGTGGCTGTGACGGATATGTCCACAGGACTGTACGCCCATGG
AGCAATTTTGGCAGCCCTCTATCAAAGGACCCGCACGCAACGTGGCCAGA
AGATCGAAGTCGACCTGTTGTCCACCTGCTGCTCCCTGCTGCTCAACGTG
GGTAGCAACTACCTGAATTCCGGGGTCGAAGCAGGAAGGATGGGCACCGC
ACACTCCAGCATCGTTCCGTATCAGAGCTTCAAGACGAAGGACGGCTATC
TCACCCTGGGCACTGGCAGTGATGTTCAGTTTGTGGACCTGTGTCGCCGC
CTAAAAGTGAACATTTGCGCAGAATCCCAAATTCAAGACACAAGATCGTG
TGACCAATCGAAGTGAGCTGCTGGGATCCTAGAGCAATGCTATCGAGACA
CTCGCCGCACTGGATGAAACTTTTCGAGGGCGCTTCCTTTCCGGTGACCT
GTAACTTCATCCGAGTCTCAGGACCGCCTATTAAGCATGTCTGTAGCCTG
CCTATTCAGACGAAACAGTCAAGTGGTAGATCTCTCTCGTGGTGAA
FMO04511.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10877-RA | 1582 | CG10877-RA | 98..1186 | 35..1110 | 5005 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20562899..20563970 | 1096..35 | 4780 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:31:40 has no hits.
FMO04511.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:33 Download gff for
FMO04511.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 98..1165 | 35..1092 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 11:01:02 Download gff for
FMO04511.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 98..1165 | 35..1092 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:39 Download gff for
FMO04511.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10877-RA | 98..1165 | 35..1092 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:39 Download gff for
FMO04511.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20562903..20563970 | 35..1092 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:33 Download gff for
FMO04511.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16388625..16389692 | 35..1092 | 98 | | Minus |
