FMO04516.5prime Sequence
1036 bp (950 high quality bases) assembled on 2008-08-04
> FMO04516.5prime
ACATTATACGAAGTTATCAGTCGACATGGCAAGACAGCGACTTCTCGGCT
CGATCCTTTCCAAAGGCGGAGCCCAAGTGCTGCGAAACTTCCAGTCATTT
GTCCAGGGCACTCGTTTGGAGTATGTCTCCTACACCTCGCCGCGCAATCA
GATGCAGGCGCCACCAATTGTGGTGATGCACGACCTCAATCTGTCACTGG
AATCCTGGCGCCAGGTAGCTGTTAACCTCAGTCAGGTTGGATTGCGCCAG
GTGATCACCGTGGATGCTCGGAATCATGGCCTTAGTCCTTACATAACCGG
GCATTCGCCAATGCACCTGGCCGCCGACGTGGAGGCCCTGATGAGCCACC
AGAGACTGAACAAGATCGTTGCACTTGGACATGGAATGGGCGGTCGGGCA
ATGATGACACTGGCACTCACTCAGCCGCAACTCGTCGAGCGGGTCATACT
GGTGGACATCACACCAGCACCGGTGCCCAGTAACTTCTATCTCACTCGGC
AGGTGTTCGAGATGATGCTCCAGGTGGCGCCCAGTATTCCCTCAAATCTA
TCACTTTCCGAGGGGCGTACGTTCATCCTGCCACTGTTCCAGGATGTGGT
CCACGACGCCTCCGAGCTGCGTCGCATTATTTACAATCTGCGCAAGATGC
AGGACAACACCTTTGGCTGGGCAGTTAATCACCAGGCGGTCCTAAGCTCC
TGGGGGGAGATGATGATCAATTACGAGGCACTTTGGGCGGACTGCGTCCC
TACATGGGCGAAGTCTTGCTCATAGCCGGTTCCCAGTCGGAATTCGTGAC
CACGACCAGTATTGCCGTGATGCAGAGATACTTTCCAAATACAGTGTACA
GATTCTGGATGCTGGACACTGTGTGTATGAGGATCAGCCGGAACATTTGT
TGAACTAGTCTGGAGTTTACTCAAACATGCTTAGTATGTGCAAGCTTTCT
AAGAACAATTCCGTTTGGCCCCGCGGTTCAGGTAGTGTTCATTATCATTA
ATCTTAATTCATATTCATATTACACCTAGCCTAGGA
FMO04516.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14717-RB | 1819 | CG14717-RB | 137..1055 | 25..939 | 4480 | 99.5 | Plus |
| CG14717-RA | 1154 | CG14717-RA | 137..1055 | 25..939 | 4480 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11696645..11697563 | 25..939 | 4380 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:25:13 has no hits.
FMO04516.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:22:40 Download gff for
FMO04516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14717-RA | 137..1060 | 25..944 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:59:25 Download gff for
FMO04516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14717-RA | 137..1060 | 25..944 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:11:20 Download gff for
FMO04516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14717-RA | 137..1060 | 25..944 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:11:20 Download gff for
FMO04516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11696645..11697563 | 25..939 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:22:40 Download gff for
FMO04516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7522367..7523285 | 25..939 | 99 | == | Plus |
