FMO04518.5prime Sequence
465 bp (465 high quality bases) assembled on 2008-08-04
> FMO04518.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTTAAGATTCT
CATCGTCGCCCTGTCCCTTTGCACGGCCGTCGTGCTGAGTGCTCCAGTGG
ACCACGTCACATCCACCACCCAGCCACCGGTGGCCATTCTCGAATCATCT
CACGAAAAGCACGAGGATGGATCGTACAACTTCTCTTACCTCGGCGAGGA
CGGCACCCACAGAAGGGAGGAGGCCGTGGTCAGAAACCAAGGCACCGAGA
ACGAGTACCTGGAGATCAGCGGCTCCTACTCCTACTTCGATGCCAACGGA
CAGGAGGTGACCGTCACCTACAAGGCCGATGACCACGGATTTGTACCAGA
GGGCGGAGCAATCCTGCCCCAGATTTCGCTGGCCGCCAAGCAGGTCAGCG
AGCAGGTGCCCCAACCAGATCTTGACTATGCTAAGCCTCCTAAGGTCGCA
AGCTTTCTAGACCAT
FMO04518.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr78E-RA | 463 | CG7160-RA | 24..435 | 36..447 | 2060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21666480..21666878 | 447..49 | 1995 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:14:29 has no hits.
FMO04518.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:01 Download gff for
FMO04518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr78E-RA | 18..438 | 29..451 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 11:02:46 Download gff for
FMO04518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr78E-RA | 18..438 | 29..451 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:35 Download gff for
FMO04518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr78E-RA | 18..438 | 29..451 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:35 Download gff for
FMO04518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21666477..21666878 | 49..451 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:01 Download gff for
FMO04518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21659577..21659978 | 49..451 | 99 | <- | Minus |