FMO04520.5prime Sequence
503 bp (503 high quality bases) assembled on 2008-08-04
> FMO04520.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGGTTCTC
ATCGTTCTCCTATTGGGTCTGGCCTTTGTCCTGGCCGATCACCATCACCA
TCACCACGACTATGTGGTGAAGACGCACGAGGATCTGACCAACTATCGCA
CGCAGTGCGTGGAGAAGGTTCACGCCAGCGAGGAGCTCGTGGAGAAGTAC
AAGAAGTGGCAGTACCCCGATGACGCGGTGACCCACTGCTACCTGGAGTG
CATCTTCCAGAAGTTCGGCTTCTACGACACCGAGCACGGATTCGATGTCC
ACAAGATCCACATCCAGCTGGCCGGCCCTGGAGTTGAGGTGCACGAATCG
GACGAGGTGCACCAGAAGATCGCCCACTGCGCCGAGACCCACTCCAAGGA
GGGCGACTCCTGCTCGAAGGCCTACCACGCCGGCATGTGCTTCATGAACT
CCAACCTGCAGCTGGTGCAGCACAGCGTCAAGGTCGCAAGCTTTCTAGAC
CAT
FMO04520.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp99b-RB | 586 | CG7592-RB | 52..499 | 38..485 | 2240 | 100 | Plus |
| Obp99b-RA | 574 | CG7592-RA | 40..487 | 38..485 | 2240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29716341..29716788 | 485..38 | 2240 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 22:13:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 7609..7647 | 382..344 | 105 | 74.4 | Minus |
FMO04520.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:41 Download gff for
FMO04520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp99b-RA | 32..492 | 28..490 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:59:27 Download gff for
FMO04520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp99b-RA | 15..475 | 28..490 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:18 Download gff for
FMO04520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp99b-RA | 32..492 | 28..490 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:18 Download gff for
FMO04520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29716336..29716796 | 28..490 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:41 Download gff for
FMO04520.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25542058..25542518 | 28..490 | 98 | | Minus |
