FMO04522.5prime Sequence
470 bp (470 high quality bases) assembled on 2008-08-04
> FMO04522.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAATTTTAAA
ACGTCTTTGATCTGTTTCGCACTGCTACTGATTGGAACTCTATGCTCGGC
CTATTCCAATCAAGAACGTCAACGTGACAGTCGTAGGGTTGCTGAAATTA
TGCGAACCTCCTGGGACGACAATACCAAAATCAAAAGAATCCAGGAACTA
CTTACCATATACAATCGCATGGCTCCTAGCTTAAGACCAGATGAAAGGGC
GAGAATGGACAGATTCATAAATGGATATACGGGAGAAATCATGGTCGATG
GAGTACCCAGTCAAGGTGGTGCTAGAAGGATCTTTAAGAAGATTCTGTCT
CCGGCGGCAAAGAGCGTGGCAACTGGATTCTTTACCGAACTCGGTGCAAG
TCTTGCAAGCATATTAACTAGCTGGTTTCCAGCTAACACAGAACGAAACC
ATGCAAGCTTTCTAGACCAT
FMO04522.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TotB-RA | 526 | CG5609-RA | 41..454 | 39..452 | 2055 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20874060..20874450 | 62..452 | 1940 | 99.7 | Plus |
Blast to na_te.dros performed 2014-11-28 20:16:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 5117..5186 | 147..216 | 143 | 67.1 | Plus |
FMO04522.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:09 Download gff for
FMO04522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotB-RA | 41..458 | 39..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:57:57 Download gff for
FMO04522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotB-RA | 29..446 | 39..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:02 Download gff for
FMO04522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotB-RA | 41..458 | 39..456 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:02 Download gff for
FMO04522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20873978..20874000 | 39..61 | 100 | -> | Plus |
| 3R | 20874060..20874454 | 62..456 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:09 Download gff for
FMO04522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16699700..16699722 | 39..61 | 100 | -> | Plus |
| arm_3R | 16699782..16700176 | 62..456 | 99 | | Plus |
