FMO04523.5prime Sequence
1252 bp (1013 high quality bases) assembled on 2008-08-04
> FMO04523.5prime
ACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTGTGACGA
AGCGAATCCAGCGAAGCCGTGGCAGCTTCCCGATGTGGTGTACGGCAATG
GGATTCCGGCGCTGTGCCTGCTGCACCAGGAGATCGAGCAGTTCTACAAC
TACATCCGGTCCACGCCAACAGAGTTCTGCTTGCGGGCAGGTGCAGTGCG
TCGCATCGAGGATGTGGTGCTTTCCATTTGGCCAAGCGCATCCGTCGATC
TCTTTGGCTCATTTCGGACCGGGCTAAATCTGCCGGACTCGGACATTGAT
CTGGTTGTGTACTATAAGTTCTGGAACCCCAGGCTGCTGCATGAGCTTCA
AAACGAACTAGTCAGCCAAGGAGTAACTGATCCGGACACTGTGACCGTCC
TCGACAAGGCCTCTGTGCCAGTGGTCAAGTTTACGGACCTCATTTCCCGC
ATCAGGTTCGATGTGACCTTCAACTCCGTAGCATCCGGCGTTCAGGCCGC
CGACCTGATCAAGGACTTTATCCGCCATTTTCCCGAACTACCCAAACTGG
TCATGGTGCTCAAGCAGTTCCTCAGCCTTCACGGATTCAACGAGGTCTAC
AACTCCGGCGGAGTCTCGTCCTACGCACTCACGCTAATGGTGATCAGCTT
TCTGCAGCAGCATGCGCGCTCCAACAGGCGTTTAAGTGAACACAGTAAGC
TGGCCCTGCTGCTCATTCAGTTTCTAGACTACTACGGCCGCAAGTTTGAC
TTCTTCAAGTATGGAATTTCTGTCCTCGGCCCAGGCGGTTGCGTGGAGAA
GGCTCGACTTCCGCTCCACGCTCGGCGAGAACAACTGGGCAGTCGGTGCT
TTGCATAGAGGATCCAGTGACGCCGACCAAACGACATAAGGGAGGAGCTC
CTATGGGGGTGCTCGGCGTGATGCAGGGATTCGGGGCAGCCCTTCGTGAA
GCTCTCGAAGCTGGTGGACTCCGACTCGTCCCAGAATCGTCGGCCCCATA
CTGGGCAACATTTGAAAAGGTGCCGCAGTCCATCATCAACTACCGGGCTT
GGGTGGCACATACAACTTCCAGCACCGTTTGACACCGGGAATTGCCCTTG
GGTCGCGATTCCCTTGTACACCGGTCGCCTACGGGGAATCCACATTCCCC
TCCGCCTCGGCCTACAGCTATCGGAGGATGAGGCCTCGGGCGCCGCTACT
ATTGGGATCGGCCCGATGTAGTTATCTCCTCCTCCAACCATAAGCACTTG
CG
FMO04523.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trf4-2-RB | 1429 | CG17462-RB | 146..1309 | 40..1219 | 5115 | 96.6 | Plus |
Trf4-2-RA | 1870 | CG17462-RA | 356..1519 | 40..1219 | 5115 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24925571..24926678 | 40..1163 | 4730 | 97.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:36:58 has no hits.
FMO04523.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:55 Download gff for
FMO04523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trf4-2-RA | 356..1470 | 40..1172 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:57:58 Download gff for
FMO04523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17462-RA | 267..1381 | 40..1172 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:33 Download gff for
FMO04523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trf4-2-RA | 356..1470 | 40..1172 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:33 Download gff for
FMO04523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24925571..24926685 | 40..1172 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:55 Download gff for
FMO04523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20751293..20752407 | 40..1172 | 97 | | Plus |