FMO04526.5prime Sequence
361 bp (361 high quality bases) assembled on 2008-08-04
> FMO04526.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGATGCTGACTATAC
TGTTTGCACAACAGTACCAAATTGTTGGAGATGTACTTCGAATATGGATG
AATCGCAAGAGTTTGGAATTCTACGAAAGTCGCTGCCAGTGCTGCGGAGT
TTTGGGACCTGACGACTACAAGTTGGGCGATCTGAATATCCCAAAATCCT
GTTACAAGAATGGCAGTGAAAGGGATGAGGACCTGTACCGATCAGGCTGC
TCCACGCGCTCCATAAAGCCCGCGTCGCCCATCATCCATGTGATCTCCTT
CGTAATTCAGTCATATGCATTGAGGTATTCCTTATTATCCTGTGCAAGCT
TTCTAGACCAT
FMO04526.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42661-RB | 2597 | CG42661-RB | 1659..1977 | 35..343 | 1435 | 96.9 | Plus |
CG42661-RA | 2531 | CG42661-RA | 1593..1911 | 35..343 | 1435 | 96.9 | Plus |
CG42660-RB | 2597 | CG42660-RB | 1659..1977 | 35..343 | 1435 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7467920..7468096 | 134..310 | 885 | 100 | Plus |
3L | 28110227 | 3L | 7467760..7467858 | 35..133 | 495 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:16:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 4216..4286 | 270..200 | 103 | 60.6 | Minus |
FMO04526.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:15 Download gff for
FMO04526.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RA | 220..532 | 35..348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:59:28 Download gff for
FMO04526.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RA | 220..532 | 35..348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:14 Download gff for
FMO04526.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42660-RB | 1659..1981 | 35..348 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:14 Download gff for
FMO04526.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7467760..7467858 | 35..133 | 100 | -> | Plus |
3L | 7467920..7468096 | 134..310 | 100 | -> | Plus |
3L | 7468156..7468192 | 311..348 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:15 Download gff for
FMO04526.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7460860..7460958 | 35..133 | 100 | -> | Plus |
arm_3L | 7461020..7461196 | 134..310 | 100 | -> | Plus |
arm_3L | 7461256..7461292 | 311..348 | 94 | | Plus |