FMO04528.5prime Sequence
794 bp (794 high quality bases) assembled on 2008-08-04
> FMO04528.5prime
ACATTATACGAAGTTATCAGTCGACATGATGCTGCTCCAGCTGGGCTGCG
TGGCCCTCTTCTGCTGCTTGGTTAGCGGTGCCTCGAATTTCCCTCCCGAA
CTGCCGCGCTGCCACATGGGCGACACCAGCTGCATCATCAACGTGTCGCA
CATGCTGATCAGACAGCACGCGAGGACCGGCTATCCGTCCGCTGGATTCC
CCCAGGTGGAGCCCTTCCTGATCAAGCGCTTCGACATCTCCGACGGACGC
ACTGGCTCCCTGAATCTAAAGCTCAACTTCAGGGACGTGAATGTGGAGGG
CCTGTCCAGTGTGAAGTTCGACAGAGCCGTTGGCTTTGGCGCTGATCCTG
CAACCAGCAAGTTTGAGATGTACGGATCCTTTCCCAAGATCGTGCTGAAG
GGCAAGTACGTGGCGGATGGACGCATCCTGATCCTGCCGATTCGTGGCGA
TGGCGATGCCGAGATCGTGTTGCACAATCCCAAGTTTTCGGTGAAATTCA
AGCCGGGCACACAGCAGCGCAATGGACGCACCTACCTGAGCGTGGATAAG
CTCAAGGTTCTGGTGGAGCCACAAAAGATGAACATTCGGCTGGAGAACCT
CTTTTAATGGCGACCAGGCATTGGGCACCAATCTGAATCAGTTCCTCAAC
GACAACTGGACGGAGGTGTGGAACGAGCTGCATCCCTCCATTCATGTGGC
CATCGCCGAGATCATGAAGAGCGTTCTCTCGCAGCTCTTCAAGCGCTTCG
CCTACGAGGATTTATTCCTCGAGAACGCAAGCTTTCTAGACCAT
FMO04528.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11852-RA | 1045 | CG11852-RA | 100..849 | 26..776 | 3730 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25238200..25238446 | 331..577 | 1235 | 100 | Plus |
| 3R | 32079331 | 3R | 25237837..25238074 | 93..330 | 1190 | 100 | Plus |
| 3R | 32079331 | 3R | 25238501..25238699 | 577..776 | 950 | 99.5 | Plus |
| 3R | 32079331 | 3R | 25237713..25237779 | 26..92 | 335 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:43:06 has no hits.
FMO04528.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:18 Download gff for
FMO04528.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11852-RA | 96..854 | 18..782 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:59:30 Download gff for
FMO04528.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11852-RA | 85..843 | 18..782 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:39 Download gff for
FMO04528.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11852-RA | 96..854 | 18..782 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:39 Download gff for
FMO04528.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25238200..25238445 | 331..576 | 100 | -> | Plus |
| 3R | 25238501..25238704 | 577..782 | 98 | | Plus |
| 3R | 25237837..25238074 | 93..330 | 100 | -> | Plus |
| 3R | 25237709..25237779 | 18..92 | 94 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:18 Download gff for
FMO04528.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21063431..21063501 | 18..92 | 94 | -> | Plus |
| arm_3R | 21063559..21063796 | 93..330 | 100 | -> | Plus |
| arm_3R | 21063922..21064167 | 331..576 | 100 | -> | Plus |
| arm_3R | 21064223..21064426 | 577..782 | 98 | | Plus |
