FMO04530.5prime Sequence
1080 bp (909 high quality bases) assembled on 2008-08-04
> FMO04530.5prime
CGAAGTTATCAGTCGACATGGGCTTTGATCTAAACTGCATTGTGGGCCAC
GTTGACGAGGAGCTCATCTGTCCAATTTGCACAGATGTCCTGGAGGAGCC
GGTCCAGTCATCGGAATGCGAGCACGCCTTCTGTCGCGCCTGCATCGACA
AGTGGATGATCCAGAAACAGATTTGCCCGGTGGACCGCTCCGGGCTACTG
ACCTCACATCTGGTGCCCGTTTCGCGCCTAATGCGCAACATGCTATCCCG
CCTAAAGATCAAGTGCACCTTCTCGCAAAGCGGTTGTGCCCAAATGCTGG
CCCTCGAGGAGTTCCGGACCCATGTCGCCGCCTGCGAGCATAATCCCAAG
GTGGTTGTCGAGTGCAGCAAGGGGTGCGGAATGAAGGTACCCAAGGACGA
GATGTCGCGCCACAACTGTGTGTTCGAACTGCGCGAGCTGGTGGAGAAAC
TGGCGAAGGAGGTTTCCGATCTGAAGCAGAAGCAATCCGATATGGAGGAG
CAGAGCTCCAGCCAGCGCCGAGAGATGGAGCTGTTCCAGTACTATATCGC
AGCACTGCGATCGACCAATCCCATGCTGCGCAACATTGGCGAACAACTGG
ACCGCTTCTCACTGATGCAGTGGGGCCATGGACTCCCTCTGGCCAACATC
CATACGTGGGGGCAGTCTGATCTCCACGCCGGACAATCCCATGCACCTGA
TGGTGCGCGACGTTTTTGCGTGAAAGCGGCTGTCCGATGCATATGCTCAA
TATGCTGGTTGAACGTTGCCACGAGGATCGCTGGCCCGAAGTCTGATGAC
GTTGGACGATCGCCGCGAGAACCAACATCTCATGAGTCGGTATGTCACCC
GATTGTGCCCGGTCTGGTCATTGGCAAATCGTGCGTGGTTGTCTGGGCGG
CAAAACCTCCACATGCCGGAGAATCTGCCTCCTCATCTCGGACTGGTCAT
GATCTTTCGTCGACGTGTGAAATGAGGTATAATTTGCCGAAAGATTATGC
CAGCTTTCCTAAACCATTCGTTGGCGCGCGATCCAGTAATGGTCCTAATC
CTAATCATATCCATAATCCTAATCCACTAG
FMO04530.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:52:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9014-RB | 1377 | CG9014-RB | 154..1141 | 13..998 | 4530 | 97.9 | Plus |
| CG9014-RA | 1368 | CG9014-RA | 145..1132 | 13..998 | 4530 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:52:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13722405..13723013 | 991..384 | 2455 | 96.1 | Minus |
| 2L | 23513712 | 2L | 13723067..13723442 | 388..13 | 1865 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:52:22 has no hits.
FMO04530.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:59 Download gff for
FMO04530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9014-RA | 145..1132 | 13..998 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 11:00:54 Download gff for
FMO04530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9014-RA | 145..1132 | 13..998 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:39 Download gff for
FMO04530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9014-RA | 145..1132 | 13..998 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:39 Download gff for
FMO04530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13722397..13723010 | 387..998 | 96 | <- | Minus |
| 2L | 13723069..13723442 | 13..386 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:59 Download gff for
FMO04530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13722397..13723010 | 387..998 | 96 | <- | Minus |
| arm_2L | 13723069..13723442 | 13..386 | 99 | | Minus |
