FMO04532.5prime Sequence
518 bp (518 high quality bases) assembled on 2008-08-04
> FMO04532.5prime
GCATACATTATACGAAGTTATCAGTCGACATGCGTTGCCAATTCGTTATC
GCCTTTGGGCTTTTGGCCCTAATAGCAACTGCCTACGCCGATTCTCCACC
TGCGGCAGGATCCCCACCCGCGTCATCTCCACCGGCTGGAACCCCAACCT
CGCCACCTCCAGCGACTGGAACACCGCCCTCACCATCCCCAGCGACTGGA
ACACCACCTTCAGCATCCCCAGCTGCTGGTACACCGACCTCGCCAACTCC
AGCGACTGGAACACCGTCCTCGCCAGCTACTCCTGATGCGCCCGCTTCCT
CGACATCACCAGCTACGCCCACATCGCCCAGTGACAGTGGATCCAGCAGC
AGCCAGGAAGTGATTAGGCTCAGGCGTCGGCTGCGCCGGCTGAGGCGTCA
GCTCCGCCGCGAGAGGCGTCAGGCCAACCAGAGTAATCAGAATGGAGGTG
GTGGTCAGGGGCGAGTGGTTCGCCGTGTACACCGTCACCGTCGTCTATTG
GCAAGCTTTCTAGACCAT
FMO04532.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11300-RA | 581 | CG11300-RA | 35..505 | 30..500 | 2355 | 100 | Plus |
| CG11300-RA | 581 | CG11300-RA | 108..250 | 133..275 | 250 | 79.2 | Plus |
| CG11300-RA | 581 | CG11300-RA | 138..280 | 103..245 | 250 | 79.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23751949..23752419 | 30..500 | 2355 | 100 | Plus |
| 2R | 25286936 | 2R | 23752022..23752164 | 133..275 | 250 | 78.3 | Plus |
| 2R | 25286936 | 2R | 23752052..23752194 | 103..245 | 250 | 78.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:31:31 has no hits.
FMO04532.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:25 Download gff for
FMO04532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11300-RA | 35..512 | 30..508 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:59:31 Download gff for
FMO04532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11300-RA | 2..483 | 27..508 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:34 Download gff for
FMO04532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11300-RA | 35..512 | 30..508 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:34 Download gff for
FMO04532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23751949..23752426 | 30..508 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:25 Download gff for
FMO04532.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19639472..19639949 | 30..508 | 99 | | Plus |
