FMO04533.5prime Sequence
477 bp (477 high quality bases) assembled on 2008-08-04
> FMO04533.5prime
ATACATTATACGAAGTTATCAGTCGACATGAAGCTCCAGGCGGACTACAG
TCTTTTCGGTCGGATCCTGCTCATCCCGCTCAACGGAAAGGGCCAGGTGT
TCCTGGACGCGGAGAACATGACGGTCACCATGCACACGAAGACTCGGCTC
TACTCCAAGGGTGGGTTCACTTTCTACAACGTGACCAACCTGCACGTGGA
TTTTAAAATGGACGGGCTCAAGTCGTACTTCTCCAATCTGTTTAATGGCA
ATAAGCAGCTGGAGGACAGCACCAACAAGTTCTTCAACGACAACTGGCGG
ATGCTGGCCGATGCCCTGTACACGGTCATCACCCAGACCATCGAGGACAT
TCTGCTGGATGTGCTGAAGAAGATATTTCACTTCATTCCAGCCAACTTCT
TTGTGAGCGACATCCCGACGCCGGAACAGCTTTATGGAAGAGCCAAGCCG
AAACCGAAAGCAAGCTTTCTAGACCAT
FMO04533.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14457-RC | 1295 | CG14457-RC | 786..1221 | 24..459 | 2165 | 99.8 | Plus |
CG14457-RB | 1298 | CG14457-RB | 789..1224 | 24..459 | 2165 | 99.8 | Plus |
CG14457-RA | 1557 | CG14457-RA | 1048..1483 | 24..459 | 2165 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22679463..22679701 | 24..262 | 1180 | 99.6 | Plus |
3L | 28110227 | 3L | 22679763..22679960 | 262..459 | 990 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:01:21 has no hits.
FMO04533.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:34 Download gff for
FMO04533.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1048..1483 | 24..459 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:59:32 Download gff for
FMO04533.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1048..1483 | 24..459 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:11 Download gff for
FMO04533.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14457-RA | 1048..1483 | 24..459 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:11 Download gff for
FMO04533.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22679463..22679701 | 24..262 | 99 | -> | Plus |
3L | 22679764..22679960 | 263..459 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:34 Download gff for
FMO04533.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22672563..22672801 | 24..262 | 99 | -> | Plus |
arm_3L | 22672864..22673060 | 263..459 | 100 | | Plus |