Clone FMO04533 Report

Search the DGRC for FMO04533

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:45
Well:33
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14457-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04533.5prime Sequence

477 bp (477 high quality bases) assembled on 2008-08-04

> FMO04533.5prime
ATACATTATACGAAGTTATCAGTCGACATGAAGCTCCAGGCGGACTACAG
TCTTTTCGGTCGGATCCTGCTCATCCCGCTCAACGGAAAGGGCCAGGTGT
TCCTGGACGCGGAGAACATGACGGTCACCATGCACACGAAGACTCGGCTC
TACTCCAAGGGTGGGTTCACTTTCTACAACGTGACCAACCTGCACGTGGA
TTTTAAAATGGACGGGCTCAAGTCGTACTTCTCCAATCTGTTTAATGGCA
ATAAGCAGCTGGAGGACAGCACCAACAAGTTCTTCAACGACAACTGGCGG
ATGCTGGCCGATGCCCTGTACACGGTCATCACCCAGACCATCGAGGACAT
TCTGCTGGATGTGCTGAAGAAGATATTTCACTTCATTCCAGCCAACTTCT
TTGTGAGCGACATCCCGACGCCGGAACAGCTTTATGGAAGAGCCAAGCCG
AAACCGAAAGCAAGCTTTCTAGACCAT

FMO04533.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14457-RC 1295 CG14457-RC 786..1221 24..459 2165 99.8 Plus
CG14457-RB 1298 CG14457-RB 789..1224 24..459 2165 99.8 Plus
CG14457-RA 1557 CG14457-RA 1048..1483 24..459 2165 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22679463..22679701 24..262 1180 99.6 Plus
3L 28110227 3L 22679763..22679960 262..459 990 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:01:21 has no hits.

FMO04533.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:34 Download gff for FMO04533.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1048..1483 24..459 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:59:32 Download gff for FMO04533.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1048..1483 24..459 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:11 Download gff for FMO04533.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14457-RA 1048..1483 24..459 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:11 Download gff for FMO04533.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 22679463..22679701 24..262 99 -> Plus
3L 22679764..22679960 263..459 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:34 Download gff for FMO04533.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22672563..22672801 24..262 99 -> Plus
arm_3L 22672864..22673060 263..459 100   Plus