FMO04542.5prime Sequence
498 bp (497 high quality bases) assembled on 2008-08-04
> FMO04542.5prime
ATCGTTTCCTTGGCCCTGGCCCAGGCCACCGACTATTGTTCGTCGGACAT
CTGCAACGGTGGCTCCCACATCGCCTGTGGGCATAGCAACTGGTGGGACA
GTAGCTGTCCCGGCGATGCCGAGCTGATCGACATCAACGATGACTACAAG
TGGGTCTTTGTCCACTCGCACAACGACAAGAGGAACTACATTGCCGGTGG
CTACGATTCCAATCACAATGCCGCCTGCCGTATGGCCACCATGGAGTGGG
ACGATGAGCTGGCCTATCTGGCCTCCCTGAATGTGCGCCAGTGCAACATG
GTGCACGATAGCTGCCACAACACCGACGCCTTCAAGTACTCCGGCCAGAA
TCTGGCATGGCAGGCCTACTCCGGCGACCTGCCCGACATGGGCTACATCC
TGGACAACAGCGTGCAGATGTGGTTCGATGAGGTGCACAACTCCAACGCC
GGTATTATTGCCGGCGGATACCCATCCGGATATAACGGACCCTGCCAT
FMO04542.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ag5r2-RA | 849 | CG9540-RA | 74..570 | 1..498 | 2465 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 14783489..14783979 | 491..1 | 2455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:16:22 has no hits.
FMO04542.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:11 Download gff for
FMO04542.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ag5r2-RA | 74..570 | 1..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:58:03 Download gff for
FMO04542.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ag5r2-RA | 64..560 | 1..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:08 Download gff for
FMO04542.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ag5r2-RA | 74..570 | 1..498 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:08 Download gff for
FMO04542.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 14783489..14783979 | 1..491 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:11 Download gff for
FMO04542.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 14677522..14678012 | 1..491 | 100 | | Minus |