Clone FMO04545 Report

Search the DGRC for FMO04545

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:45
Well:45
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG1421-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04545.5prime Sequence

608 bp (608 high quality bases) assembled on 2008-08-04

> FMO04545.5prime
TACATTATACGAAGTTATCAGTCGACATGGATGGTCTGTCGCGGAAGGCG
TTCCATCAAGTCGTTGGAAACAATTCAGACCATACCATTTTGCAGGATAA
TAAAAAGAAGTATGGCGAAGATCCCAGACAGTCTTTTTGGGTATCCGTAA
GCGACTACGAGTTGGACAGGGCTTACATTGTCTACTGCTTCTTTCTCGAT
ATCGGTGGCATTGTTGCCAAAAGCTTGACGAAAACCAATCGCATGTACCT
GAAGTACTTCAGCGTGGAGGATGCCCGAATCGCGCTGAGCTACGATGGCC
AAAAAATTGGATATGGCGGGGATATTCGCGTAAAAGTCACAGCTGAGAAC
CCCGTTTCCGAGAATGCCGTCAGTGAATTTCTGGAGCAATGCTCAGAGGG
CAATGGCGATCCCCCTGACAATGAAACTACAGGAATGGCTATTGTCGATG
CCGCGGATGAAAGAAACGCGATCATTTCCGATCAACTGCTGATGGGAAAC
CGTGGAGAAAATAAGTCCAAGGGCACTACCAAAAAAGTCGGTTTTTCCCA
GTGGCTTAAAGAAAAACTATCTTATGTGTTCTACTTTTATGCAAGCTTTC
TAGACCAT

FMO04545.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:31:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG1421-RA 747 CG1421-RA 158..721 27..590 2820 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:31:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21903150..21903713 27..590 2820 100 Plus
Blast to na_te.dros performed on 2014-11-28 21:31:39 has no hits.

FMO04545.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:35:54 Download gff for FMO04545.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 154..727 19..598 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 11:01:12 Download gff for FMO04545.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 85..658 19..598 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:23 Download gff for FMO04545.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1421-RA 154..727 19..598 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:23 Download gff for FMO04545.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 21903146..21903719 19..598 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:35:54 Download gff for FMO04545.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21903146..21903719 19..598 98   Plus