FMO04548.5prime Sequence
780 bp (777 high quality bases) assembled on 2008-08-04
> FMO04548.5prime
CATTATACGAAGTTATCAGTCGACATGAACATCCTCCTGCGCTTAATCGT
CTTCGCCCTGGATCCTCTGGGTCTGGGCCGACGTTTCCTCATCCGGCCTG
CCGTGAATCTGGGCTGGAACGTCTACGATCGCGTGCGCAGCAAGGCGGAC
GAGAAGGTGGGCACGGTGCGAGAGCTGGTCCTCCGGCTGGGCCTCATCGC
CTTCGCCGTGGTGCTCATCATCTGGCTGGCGGTCTTCATGTACGCCGCCT
TCTACTACGTCTACATGCCGGCCATATCGCACACCCGACCCGTTCACATG
CAGTTCAAAACCTGCCTGGAGACCAGCACGCCCTGCACCTTTCCGCACGC
GCACGTCTCGCTGACGAAGAAGCAGCAACTCCTGATGGTTGGCCAGGCGT
ACAAGGTGATCGTGAACATCGACATGCCGGAGTCGCCGCAAAATCTCGAG
CTGGGCATGTTCATGGTGTGCGCCGAGATGAGGGACTACGACTCGATGCT
GAGGGGTCACTCCTGTCGGTCTGCCATGATGCGCTATCGTTCGCCGCTGA
TCCGCATGATCTCCACGTGGGTCCTGAGTCCGCTCTATGTGCTTGGCTGG
AAAGAGGAGTTCCAGCAGGTGCCAGTTGAGATATTCTCACGGTATCTGGA
GGAGCGACAACATCCCATAACGGATGTCTACGTGGAGATACAGTCGCAGA
AGATCCAGTTCTACACGGTCACCCTGCACATAGTTGCCGATTTTACCGGT
CTGCGGGTCATCATGTTCAACTGGCCCGTA
FMO04548.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Seipin-RA | 2045 | CG9904-RA | 511..1267 | 24..780 | 3665 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2620825..2621296 | 309..780 | 2300 | 99.2 | Plus |
| X | 23542271 | X | 2620309..2620593 | 24..308 | 1365 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:12:46 has no hits.
FMO04548.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:08 Download gff for
FMO04548.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Seipin-RA | 511..1266 | 24..779 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 11:01:08 Download gff for
FMO04548.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9904-RA | 510..1265 | 24..779 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:08 Download gff for
FMO04548.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Seipin-RA | 511..1266 | 24..779 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:08 Download gff for
FMO04548.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2620309..2620593 | 24..308 | 98 | -> | Plus |
| X | 2620825..2621295 | 309..779 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:08 Download gff for
FMO04548.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2514342..2514626 | 24..308 | 98 | -> | Plus |
| arm_X | 2514858..2515328 | 309..779 | 99 | | Plus |
