Clone FMO04551 Report

Search the DGRC for FMO04551

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:45
Well:51
Vector:pMK33-CFH-BD
Associated Gene/TranscriptArc2-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04551.5prime Sequence

616 bp (616 high quality bases) assembled on 2008-08-04

> FMO04551.5prime
ACGGAAGTTATCAGTCGACATGACGCAGATGTCCGACGAACAGTTTCGCA
TATTCATAGAAACCATTAAATCGCTGGGGCCAATCAAAGAGGAACCGCCA
TCCAAGGGTAGCTTTAGCAACTGCACGGTGAGATTCAGTGGCCAGCGGGA
TCACGATGCCGTGGACGAGTTCATCAATGCCGTGGAGACGTATAAAGAGG
TGGAGGGCATCAGCGACAAAGATGCGCTAAAGGGTTTGCCGCTGCTCTTC
AAGAGCATTGCCGTGGTGTGGTGGAAGGGTGTGCGCCGGGATGCCAAGAC
CTGGTCGGATGCCCTGCAGCTGCTGCGCGATCACTTCTCGCCCACTAAAC
CTTCCTACCAGATATACATGGAGATCTTCGAGACGAAGCAGTCCTACGAC
GAGGTGATCGACTCATTCATCTGCAAGCAGCGAGCGCTCCTAGCCAAGTT
GCCGGAGGGACGACACGACGAGGAGACGGAGCTTGACTTCATCTACGGGC
TGATGCAGCCCAAGTACCGGGAGAGCATACCCCGACACGAGGTCAAAACC
TTCCGGGAGCTACTCGATCGGGGGCGAACTGTGTAGCGCACAAGGCACGC
AAGCTTTCTAGACCAT

FMO04551.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:33
Subject Length Description Subject Range Query Range Score Percent Strand
Arc2-RA 902 CG13941-RA 117..695 20..598 2835 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14362040..14362618 20..598 2835 99.3 Plus
Blast to na_te.dros performed on 2014-11-28 19:12:32 has no hits.

FMO04551.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:03 Download gff for FMO04551.5prime
Subject Subject Range Query Range Percent Splice Strand
Arc2-RA 110..702 12..606 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:58:07 Download gff for FMO04551.5prime
Subject Subject Range Query Range Percent Splice Strand
Arc2-RA 90..682 12..606 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:03 Download gff for FMO04551.5prime
Subject Subject Range Query Range Percent Splice Strand
Arc2-RA 110..702 12..606 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:03 Download gff for FMO04551.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 14362033..14362625 12..606 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:03 Download gff for FMO04551.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10249538..10250130 12..606 98   Plus