Clone FMO04556 Report

Search the DGRC for FMO04556

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:45
Well:56
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG12341-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04556.5prime Sequence

439 bp (439 high quality bases) assembled on 2008-08-04

> FMO04556.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTCTCGGACG
ACACCGATGAGTTGGACACCATCGCCGATGTGATGGGACTCCGGTCACAG
GCGCGTTTCAATACGTTTCGCGAAATGTGGTACCACGTCTTTCTGTGGGC
CCTGTTCTCCTCCATATTCATTCACACCTGCGCCGCCGTGGTGGCCTTCT
TCACGCTCCGGAAGCACAAGTTCGGACGATTCTTCTCGATCCTCATCCTT
GTCATGGGATTCCTTTCCCCGGCCTCCAGTGGCATCATCAGCAGTGCAGT
CATCGCCTTTGTGCATCGTGCCTCCAGTCTGCCCATGTCGCCCATATACG
CCATGATCTGGGGCCTCGGCCAGACCATCGTCTCCGCCTGCCTGGGATTC
ACCCGGATTCTGGCCACGCTAGCAAGCTTTCTAGACCAT

FMO04556.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG12341-RA 1100 CG12341-RA 507..891 37..421 1865 99 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:16
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10812366..10812750 421..37 1865 99 Minus
Blast to na_te.dros performed on 2014-11-28 20:11:16 has no hits.

FMO04556.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:35 Download gff for FMO04556.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12341-RA 507..897 37..427 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:59:41 Download gff for FMO04556.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12341-RA 527..917 37..427 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:54 Download gff for FMO04556.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12341-RA 507..897 37..427 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:54 Download gff for FMO04556.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 10812360..10812750 37..427 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:35 Download gff for FMO04556.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6699865..6700255 37..427 98   Minus