FMO04558.5prime Sequence
390 bp (390 high quality bases) assembled on 2008-08-04
> FMO04558.5prime
ACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTGTGCATT
TGCAACGCATTTGCTGAAGTGCGGGCGCCACGGTTTTCAAGTGGTTAATC
CACCACGCGCTTCCGCTCTTCACTTAATACGCGCTCTTCCGGCTCTCTTA
AAAGGACCAAGGCGAAGAGAATTGGGGCGATGGTTTCTGCGCCGACAGCC
TGCGCCTGAGTCCTTGGCCGCGGCGGCAGAAGACCAAAGCAGCACAACCA
GCAGCATCCGAGTGCGAAGCAACCAGCATCCAAAACCGAATCCAAAACTC
CGGCTCAGTGTGAATTTGCGACTCGAGAGCGACGGCGGCTCAAAGGAAAC
TTGGCTCGGAAAGTGTCTCGAGGCAAGCTTTCTAGACCAT
FMO04558.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42613-RG | 4961 | CG42613-RG | 51..383 | 40..372 | 1665 | 100 | Plus |
| CG42613-RE | 6672 | CG42613-RE | 51..383 | 40..372 | 1665 | 100 | Plus |
| CG42613-RH | 4927 | CG42613-RH | 51..383 | 40..372 | 1665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18929246..18929565 | 40..359 | 1600 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:25:56 has no hits.
FMO04558.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:23:14 Download gff for
FMO04558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42613-RH | 51..383 | 40..372 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:11:43 Download gff for
FMO04558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42613-RH | 51..383 | 40..372 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:11:43 Download gff for
FMO04558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18929246..18929564 | 40..358 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:23:14 Download gff for
FMO04558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14754968..14755286 | 40..358 | 100 | -> | Plus |
