Clone FMO04559 Report

Search the DGRC for FMO04559

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:45
Well:59
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG30010-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04559.5prime Sequence

551 bp (551 high quality bases) assembled on 2008-08-04

> FMO04559.5prime
ATAGCATACATTATACGAAGTTATCAGTCGACATGCTCTTCCTGGACGAT
GCAAAGATGAAAAACTTCACCAGCTGCTTTAAGGAGAAGGATTTCCTCAA
GTTCTTTTTCAACCGACTGCGGCTAAACAAAACGAGCAGATATGAAAGCG
AATTTCCATACATTTCCCTCTGTGGCCGCGAAAGGAATTTTATTAGGTGC
GATGACACACCTGTTGTGTTTACTGAACAGCTGAGGAAGGACGATACGGA
GGTGCTCAGCTATGCACACGCGGGACAGGTCCTTACCCTGCCTTACGAAC
CCCACAAACTGTACATGGATCCGCGAAACGGAAGGGTCTATCATCCAGCT
GCGCCACAGGTGGGCGGAATAGGCCTAGTCCGCTCCAAACTGGCCATCGA
GCTCAGCCAGCACTTTGAGTTTCTCGCTGGCGAGGCTTCCCCCACACATT
TCCAATGGAACGGAGAACGTTTAGAGTTGCAGAACGAGTGGGTTAACAAT
ACTCAGCGATTTCCCATGAACGAGGATTGTAAAGCAAGCTTTCTAGACCA
T

FMO04559.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG30010-RB 873 CG30010-RB 311..811 33..533 2505 100 Plus
CG30010-RA 704 CG30010-RA 142..642 33..533 2505 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9864016..9864514 35..533 2495 100 Plus
Blast to na_te.dros performed on 2014-11-28 23:25:01 has no hits.

FMO04559.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:22:31 Download gff for FMO04559.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30010-RA 134..647 23..541 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:58:06 Download gff for FMO04559.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30010-RA 134..647 23..541 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:11:14 Download gff for FMO04559.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30010-RA 134..647 23..541 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:11:14 Download gff for FMO04559.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 9864014..9864519 32..541 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:22:31 Download gff for FMO04559.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5751519..5752024 32..541 99   Plus