FMO04562.5prime Sequence
1225 bp (1033 high quality bases) assembled on 2008-08-04
> FMO04562.5prime
TAACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGATCGCA
GCGCTCGGGCTGATCTTCGGCATTCTAACGGCCTTGGTGGTCGTGGCACT
TAAGCTACTGGGCCTGAAGCCGCCACTAATCTTCGGCAAGTACCCACTGA
AAGGCATCTTTTACCGGGTGAAGTTCTGGATCGCCCTGCTTGTCCTTCGC
CGCCTGAGGTACCGCATCTACCGTCGGAACGAGGAGCTGCTCGGCTCCGA
GGAGCACCTGGCCAAGGTCGACAGGCCGCAGCAGCTCAGCAACGACCCGA
AGAGCTATGACGTGGTCAGCTTCATGGCGGCCAACAAGGAGGGCCAGAAA
CTAATGGTCACCTTGGAGCGAAGGAGGCGCGGAGTCCTCAAGGCGGCACT
GTACCTGTGGCTTCCCGAAAGCGGCCTGTTCAGTTCGCCGAATCTGCCCG
ATATGGTATACTTCACCACCGCGGATGGAGCGGAGAGCAACGCGTTCCAG
GGTGGAGGCTTCCACGTCTACCAGGAGGCATCTATGCGTGTGTGGCGGCT
CAAGTACTCCGGACTGCTGAAAACTCAAGGGCCGGACGTGCAGGACGTAG
CCGTGGACTTGGACCTCCGTTTCGAAAGCTCCTCCGCTGAGCACTTCGAC
TACAACAGAGATCTGAGCAGCGCCCTGATAGCCGACTCCATAGCCAGAGA
GGCCTGGAACGAAAAGTTCTACAGCCTGCTGCGCAGCGTCAACCACATCG
TAGAGAAGCGCACCCACTACGAACAGAACGGAGAACTGGCCGGCCAGGTC
ACGCTCGATGGCAAGGAGCTGGCGCTGAAAATGGTGGGCTTCCGGGACCA
CAGCTTCGGCACCGAGCGCTGCCTAAGCTCCATCAACCGGTACGTGTACT
TTGCCCTCTTTATGGACGATGGCAGCAGCATGGTGGTGGGCAGCCTCAGT
CAGCCGTTCTTTCTTCCTGTCCTCCCTGAAGGTGGGCTACGTGTGCAGCC
CCGAGCCGGCAGTTATCAGTCCGCTGGACCGGGAGCACTTTCGAGCCTGT
ACTTCGTACGGCGAAAAGGAACGCCGCCGCAGACACTGAATTCATTGGTG
CGCCACCGAGGAAGCGGGGAGTACCCTCGTGCAATTCAGTGAGCCTTCGC
GCCTGCCTAGCTGCAGCACCTGAAGAGTCTAAGGATTCAACACAGGTTGT
GGGGCTCTGTGCCACAGCATCACGC
FMO04562.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:17:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3706-RA | 1545 | CG3706-RA | 112..1196 | 40..1134 | 5030 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:17:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 931328..932364 | 1082..40 | 4775 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:17:53 has no hits.
FMO04562.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:51 Download gff for
FMO04562.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3706-RA | 108..1169 | 34..1103 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:59:43 Download gff for
FMO04562.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3706-RA | 304..1365 | 34..1103 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:13 Download gff for
FMO04562.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3706-RA | 108..1169 | 34..1103 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:13 Download gff for
FMO04562.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 931307..932368 | 34..1103 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:51 Download gff for
FMO04562.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 825340..826401 | 34..1103 | 98 | | Minus |