FMO04568.5prime Sequence
859 bp (829 high quality bases) assembled on 2008-08-04
> FMO04568.5prime
ATACGAAGTTATCAGTCGACATGGTTGTGGATTTCGTAGCCGGACTCCTG
GGCGGAGCTGCTGGTGTTCTTGTCGGCCATCCCTTCGATACCGTGAAGGT
CCACCTGCAAACCGATGATCCTCGCAATCCCAAGTACAAAGGCACATTCC
ACTGCTTCCGGACGATAGTGCAAAGAGACAAATTCATAGGATTATATCGT
GGTATCAGCAGTCCCATGGGAGGAATCGGATTGGTGAACGCCATCGTTTT
CGGGGTCTACGGAAACGTGCAACGCTTGTCCAATGACCCCAATTCGCTGA
CGTCACACTTCTTCGCTGGCTCCATCGCTGGTGTCGCCCAGGGTTTCGTG
TGTGCGCCCATGGAGTTGGCCAAAACGCGACTCCAATTGTCCACGCAGGT
TGATAGCGGCATCAAGTTCACTGGACCCATTCACTGCCTCAAGTACATAG
TAAAAACGGAGGGTATCAGAGGTGCCTTCAAGGGATTAACAGCCACCATT
CTAAGGGATATTCCAGGCTTTGCCAGCTACTTTGTGTCCTTCGAGTACCT
TATGCGTCAAGTGGAGACACCCCGGCGTTGCGTACACTCTAAATGGCCGG
CGGATGTGCTGGCATGTCGTCCTGGTTGGCGTGCTACCCCATCGACGTGG
TGAAGACCCACATGCAGGCCGATGCCCCTGGCGCGAATGCCAAATACAAT
GGCTTCATCGACTGTGCCATGAAGGGCTTTTAGGAACCAGGGACCGCAGT
ACTTCTTTTCGCGGTCTAAACTCCACCTTTGATCCGGGCTTTTCCGATGA
ACGCCGCCTGCTTTCTTTTGTGGTGTCCTGGGTACTGGACATCCGCATTG
CCAAGGGCT
FMO04568.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4995-RD | 1246 | CG4995-RD | 139..969 | 21..858 | 3940 | 98.6 | Plus |
| CG4995-RB | 1431 | CG4995-RB | 324..1154 | 21..858 | 3940 | 98.6 | Plus |
| CG4995-RC | 1205 | CG4995-RC | 98..928 | 21..858 | 3940 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10323847..10324310 | 54..517 | 2320 | 100 | Plus |
| 2L | 23513712 | 2L | 10324375..10324713 | 513..858 | 1325 | 96.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:14:01 has no hits.
FMO04568.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:45 Download gff for
FMO04568.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4995-RC | 98..928 | 21..859 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:59:47 Download gff for
FMO04568.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4995-RB | 324..1154 | 21..859 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:21 Download gff for
FMO04568.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4995-RC | 98..928 | 21..859 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:21 Download gff for
FMO04568.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10323746..10323779 | 21..54 | 100 | -> | Plus |
| 2L | 10323848..10324309 | 55..516 | 100 | -> | Plus |
| 2L | 10324379..10324713 | 517..859 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:45 Download gff for
FMO04568.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10323746..10323779 | 21..54 | 100 | -> | Plus |
| arm_2L | 10323848..10324309 | 55..516 | 100 | -> | Plus |
| arm_2L | 10324379..10324713 | 517..859 | 96 | | Plus |
