FMO04569.5prime Sequence
720 bp (720 high quality bases) assembled on 2008-08-04
> FMO04569.5prime
AACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCCTTCC
TGGCAATGGACCACCACCATCATCATCATCATCAGCAGCCGCGTCAGCAC
CACCTCAGCATGTGGCCATCATTCGCCGTCTGTCTGCTCCTCCTGCAGAC
CACCACGACCACCATGGCCATCGATTTGAGTCGTTTGTACGGGCACATGG
CCAATCCCATCGTGAAGCGGAGCGAAGCCTGTCATCCGTATGAGCCCTTC
AAGTGTCCCGGGGATGGTAATTGCATTTCCATCCAATATTTATGCGATGG
TGCACCCGATTGCTCTGACGGATACGATGAGGATATGCGTCTATGTACGG
CTGCCAAGCGGCCGCCGGTCGAGGAGACCGCATCCTTCCTCCAGAGCCTG
ATCGCCTCCCACGGACCCAATTACCTGGAAAAACTTTTCGGCAGCAAGGC
ACGTGATGCCCTTTCACCTCTCGGCGGAGTCGAGAAGGTCGCCATCGCGT
TGAGTGAGTCGCAAACGATTGAGGATTTTGGAGCTGCCCTTCATCTAATG
AGATCGGACCTGGAACACTTGCGCTCGGTTTTCATGGCGGTGGAGAACGG
GGATCTGGGCATGCTGAAAGTCGCTGGGCATCAAGGACTCGGAGCTGGGC
GATGTGAAGTTCTTCTTGGAGAAGCTGGTCAACACCGGCTTCCTCGACGC
AAGCTTTCTAGACCATTCGT
FMO04569.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31221-RC | 4352 | CG31221-RC | 649..1305 | 41..698 | 3265 | 99.8 | Plus |
CG31221-RB | 1633 | CG31221-RB | 644..1300 | 41..698 | 3265 | 99.8 | Plus |
CG31221-RA | 4352 | CG31221-RA | 649..1305 | 41..698 | 3265 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 19454066..19454265 | 353..552 | 1000 | 100 | Plus |
3R | 32079331 | 3R | 19416205..19416388 | 41..224 | 920 | 100 | Plus |
3R | 32079331 | 3R | 19457118..19457264 | 551..698 | 690 | 99.3 | Plus |
3R | 32079331 | 3R | 19440702..19440831 | 224..353 | 650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:26:02 has no hits.
FMO04569.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:23:18 Download gff for
FMO04569.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31221-RA | 645..1305 | 35..698 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:29:32 Download gff for
FMO04569.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31221-RA | 640..1300 | 35..698 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:11:46 Download gff for
FMO04569.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31221-RA | 645..1305 | 35..698 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:11:46 Download gff for
FMO04569.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19416199..19416388 | 40..224 | 97 | -> | Plus |
3R | 19440703..19440831 | 225..353 | 100 | -> | Plus |
3R | 19454067..19454265 | 354..552 | 100 | -> | Plus |
3R | 19457120..19457264 | 553..698 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:23:18 Download gff for
FMO04569.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15241921..15242110 | 40..224 | 97 | -> | Plus |
arm_3R | 15266425..15266553 | 225..353 | 100 | -> | Plus |
arm_3R | 15279789..15279987 | 354..552 | 100 | -> | Plus |
arm_3R | 15282842..15282986 | 553..698 | 99 | | Plus |