FMO04572.5prime Sequence
576 bp (576 high quality bases) assembled on 2008-08-04
> FMO04572.5prime
ACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAAATGCA
TATGAAACATCTAGATTTATATTCCCAGGCTATAAAGACGCTCCGCTGGA
CACAGCCAATGCGGGCTCTGTCCACGGTAAACACCAGTTCCGGCGTACAA
GGCAATCTTTCACCTGCGGCACCTGCTCCGGAACCGGATAAACTCTACAG
CAAGCTGGAGATTGAGCTGCGGGGTATTGATCCGGCAGTTCTGAAGAGCT
ACACCTGGTTTGCTACTACTGCTGCCGAGCATTTGGGCATTGAAAAGGGA
AAATGTTGGTCACCTCGCAAGGCGCACCACGAGCGGATGACGCTCCTGAA
GTCGGTGCATATCTACAAGAAACATCGCGTACAGTACGAGGTGCGAACCC
ACTTCCGCTATATGAACTTCCACAAGTTGACGGGCTCCACGCTAGATACA
TTTCTAGAGTATATTGAACGTAATCTGCCCGAGGGCGTAGCGCTGCAGGC
TTCCAGGACTGAGCTGCAGGAGATCCCAGAGCACTTGCGCCAGCCGCCGG
AGCAAGTTGCAAGCTTTCTAGACCAT
FMO04572.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS10-RB | 746 | CG4247-RB | 61..579 | 40..558 | 2595 | 100 | Plus |
| mRpS10-RA | 723 | CG4247-RA | 74..556 | 76..558 | 2415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15229762..15230027 | 40..305 | 1330 | 100 | Plus |
| 3R | 32079331 | 3R | 15230096..15230349 | 305..558 | 1270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:12:38 has no hits.
FMO04572.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:05 Download gff for
FMO04572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS10-RB | 54..583 | 29..564 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:59:42 Download gff for
FMO04572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS10-RB | 1..532 | 32..564 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:05 Download gff for
FMO04572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS10-RB | 54..583 | 29..564 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:05 Download gff for
FMO04572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15229755..15230027 | 29..305 | 98 | -> | Plus |
| 3R | 15230097..15230353 | 306..564 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:05 Download gff for
FMO04572.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11055477..11055749 | 29..305 | 98 | -> | Plus |
| arm_3R | 11055819..11056075 | 306..564 | 98 | | Plus |
