FMO04576.5prime Sequence
691 bp (691 high quality bases) assembled on 2008-08-04
> FMO04576.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCAGTCGTCGG
TGCAGTTGCTCAAGGAGGTGGGCGATGTGAACGACATGATGCAGCTCGCG
AGGTGTGGCCACCGCGCCGGGGCCTCCAAGATACAGCGACTGATCGTGGG
TTTCGAGACGGTTAATGCTGTGAACGCCCCGCAAACCTCCGCCGTGGCGG
GCATGAGTTTGCCTTCTGACCTCACCGAGATTCAAGGTCTATTGGTGGAA
TTTGAGCACCTCAATGAAAGCCAAGTTCTGCGGGAGAGCCAGGAGAACTT
CAAACGTGCCCGAGACTCACTGGAGAAGGTTCTCGGCTTTCTAGAGAAGA
TTGGCAGCGAATCTTCACGGCCGTCTCCACAAGGAAGTCAGCTCTTTGGG
TGTCCCAGTGCCAGCCGCAGCCTGCGCGAGAAGATCGAAGCATTCAACAA
GGTCTTAGAGGCGGCCCCCGAGAAACTTGGGGATACCTGCCGTCATTTTA
AGGAGTGCTTTTGTAGCTGCTGCACCTTGGACGAGTCCTTCCTGTCTAAA
GGGCACAATCCCCTTCCCGTTGCCTCGAAAACAAATTCGGGCTACGAGGG
GGACATAGACAGCGAGGTAGAGCAGCCGGAGCGGTCCAATAACGAATCGG
GGGCGGATATAAGGGCCGATCGGGCAAGCTTTCTAGACCAT
FMO04576.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:17:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1971-RD | 1028 | CG1971-RD | 133..768 | 38..673 | 3180 | 100 | Plus |
| CG1971-RC | 1034 | CG1971-RC | 139..774 | 38..673 | 3180 | 100 | Plus |
| CG1971-RB | 1106 | CG1971-RB | 211..846 | 38..673 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:17:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31805874..31806509 | 38..673 | 3180 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:17:42 has no hits.
FMO04576.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:44 Download gff for
FMO04576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1971-RA | 277..918 | 32..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:58:17 Download gff for
FMO04576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1971-RB | 136..777 | 32..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:07 Download gff for
FMO04576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1971-RB | 208..849 | 32..677 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:07 Download gff for
FMO04576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31805871..31806512 | 32..677 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:44 Download gff for
FMO04576.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27631593..27632234 | 32..677 | 99 | | Plus |
