FMO04578.5prime Sequence
378 bp (378 high quality bases) assembled on 2008-08-04
> FMO04578.5prime
CAACAAGGTTCCCGCTTGTGGAATGGTCTCAGTGCCGCGCGTGGTTTCCA
CCTTCTCACCCGGCCGGCGGCTCCTGCAATTGTATCAATTCAAAGCTCGC
AACTTGTGGCCGCCACAACTGGAATCTGTCAGACGTCGGGTCTGCTGACG
CCTGGCTCCACTTTGGTCCAGCAGGTGGCGGGATTCAAGGTCAAGGGACG
CCTGAAGCGACGCTGCAAGGACTGCTACATCGTGGTGCGCCAGGAGCGCG
GTTATGTCATCTGCCCCACGCATCCACGCCACAAGCAGATGTCGATGAAC
AAGCGCGACTACAAGTCGTGGATCCTGACGCACGCCACCCAATCCAAGGA
GCGCGGCTATGCAAGCTTTCTAGACCAT
FMO04578.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:06:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL36-RA | 495 | CG18767-RA | 65..424 | 1..360 | 1785 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:06:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8124655..8125014 | 360..1 | 1785 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:06:40 has no hits.
FMO04578.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:14 Download gff for
FMO04578.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL36-RA | 65..424 | 1..360 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 11:01:19 Download gff for
FMO04578.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL36-RA | 46..405 | 1..360 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:17 Download gff for
FMO04578.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL36-RA | 65..424 | 1..360 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:17 Download gff for
FMO04578.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8124655..8125014 | 1..360 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:14 Download gff for
FMO04578.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8117755..8118114 | 1..360 | 99 | | Minus |
