FMO04579.5prime Sequence
661 bp (556 high quality bases) assembled on 2008-08-04
> FMO04579.5prime
AGCATACATTTTTACGGAAGTTATCAGTCGACATGCCCATCCTGAACGAG
CTGGCGCATCGTGGTCATGACATCACGGTAATCTCGTACGTTAAGAACCC
CCAAGCCGGAGCCTATCCCAACTATGAGGAGCTACTGATTTCGGCTCCCG
GTGAGGATCAGTCGAGCACCACGATCAACTTGGTTCCCCTGACGGAGCAC
ACACCCACCAGATCCCTGGGAGTCCTCATCCGTGAGTATGTAGATCTGCA
CGAAGAGGGCCAGAAGACCTGCGAGCACCTCTTCGCCAGTGGCCACATAG
AACGGGCCATCGAACGACATCGAAATAAGCCCTACGATCTGCTACTCACG
GAATACTTCATCTCCGATTGCCAACTGGCCTTGGCCAAGTTATTAAATCT
GCCAATTATAGGCTTAAGTACCTGCGCGCTGATGCCCTACTATTACGATC
GCATCGATTTGCCCGACACACCTGCCTTCATACAGTCGGAATTCGTGGGT
TTCGCTGGCCAACTGAACTGGAACGAACGGCTGCTCAACTTTGTTCAGGC
CAAGTTATTAAAGTTTCTGTACAAGTACCATTCCAACAGGGCTGACAACG
AGTTGGTACGGAAGTATCTTGGAGTGGAAGTAGACGTAAAAAAGTACCTC
GAACTCAAACT
FMO04579.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:31:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dot-RB | 2303 | CG2788-RB | 322..951 | 33..661 | 3065 | 99.2 | Plus |
| Dot-RA | 1720 | CG2788-RA | 141..770 | 33..661 | 3065 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:31:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3619418..3620047 | 33..661 | 3040 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:31:29 has no hits.
FMO04579.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:35:47 Download gff for
FMO04579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dot-RA | 135..770 | 27..661 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:59:50 Download gff for
FMO04579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dot-RA | 222..857 | 27..661 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:18 Download gff for
FMO04579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dot-RA | 135..770 | 27..661 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:18 Download gff for
FMO04579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3619412..3620047 | 27..661 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:35:47 Download gff for
FMO04579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3619412..3620047 | 27..661 | 98 | | Plus |
