FMO04590.5prime Sequence
1227 bp (1014 high quality bases) assembled on 2008-08-04
> FMO04590.5prime
ACCTTATACGAAGTTATCAGTCGACATGGCACTCATTGAGAACCTCAATG
ATGACTGCGTGCTTAAAATTGTAGATTACCTCGATCTGGAGGATCAGCTG
AAGCTGTGGAAGAGTTCCGAGCCCGCATCGCGACTGAGATCGCTGATATC
CTACATCTGGCAGCGCAATCGGGAATATACCATTGACTATTATACATTCA
ATGACGACTATGAGCTACTGAACGAATTCCTGCAGTGCATTCGCTTCACG
GTGACGGAACTTACACTCCAATACCTAGCCATGGATCACCTGGAGCGGTG
GAAGGGTCACACCTTCCCCAACATGCGTCAATTGATCTACTTGGGCGATG
AGACCAGTGAAATAGAAGGAGACGCCGACATCGCCATTCTGGTGGACTGC
TTCCCGCAGCTGGAAGCCATCAGGCTGAGCGGGAAGACTACTGGTAACCA
CATCAGTCGTTGGCGGAACATTCGCCGACTGGACCTTCAGCTGTGCTGGT
ACCTGAGCCCGCAGGGCTTCGAGGATATCTGTCAAAACCTGCGACTACAG
ACACTCAGTATCCAGTGGCAAAAGATCGAACAGAATGCATACGTGCGATC
CATCTGTATGCTGCATGAACTGGAGGAGCTGGAGCTGGACATAGTTTACC
TAAACAGGGACAACATCAGCCAACTGTTGAGCCCTGCCTAAACTGATAAA
GCTGCGCCTGCACAACTTCTACCAGGTGGACGATCTACTGTGCGAAATTG
GAAGCATAAGGGGTCAAGATGTGTTGACTGCCGCATTCAGTAATATATCT
GGATGAGGCCAACGGAGGTTCTGGCCAAACTGCGAAATCTCCGATGTTTA
ACTTCTCGTCGATGATGAAGGATGTGCTGCCATTGACTTTTCCACGATCA
CCTATTGCTTTCCGCTCTTGGAGCAACTGCATCTGGAGAACTCGCGTATA
TGGGTCAACGCCGATGGTATATGGGAACGTGCTTCCTGCCTGTCCCCGGT
CTCAGGGATTCAACATGATCAACAATGTTTTGGACCGACGAGTTCCTTGC
CCTTCAGCAAGTCAACATGACGGCGCCTCTAATCACGCAAACGAAGCCTT
GGAAATGCAATTTTATAAAAACGCAAGGATGACTGGTTCGAAGCCATTAA
CTTCCTAACTAAGTTCCTTCAGCTCATAGTGAACGCAATTCACAATATCA
TGGACAGAGATTGAATTGAGTGAAAGT
FMO04590.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31633-RA | 1452 | CG31633-RA | 87..1208 | 24..1144 | 5060 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6655142..6656141 | 1067..64 | 4540 | 98.6 | Minus |
| 2L | 23513712 | 2L | 6656196..6656235 | 63..24 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:14:09 has no hits.
FMO04590.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:48 Download gff for
FMO04590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31633-RA | 79..1215 | 15..1150 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:59:53 Download gff for
FMO04590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31633-RA | 59..1195 | 15..1150 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:24 Download gff for
FMO04590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31633-RA | 79..1215 | 15..1150 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:24 Download gff for
FMO04590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6655060..6656141 | 64..1147 | 97 | <- | Minus |
| 2L | 6656196..6656233 | 26..63 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:48 Download gff for
FMO04590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6655060..6656141 | 64..1147 | 97 | <- | Minus |
| arm_2L | 6656196..6656233 | 26..63 | 100 | -> | Minus |
