Clone FMO04591 Report

Search the DGRC for FMO04591

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:45
Well:91
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG8281-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04591.5prime Sequence

578 bp (258 high quality bases) assembled on 2008-08-04

> FMO04591.5prime
AAGTTATCAGTCGACATGCTGCCACAAACGCCGCCGCACGGATTGAAGGT
GATGTCGGGAGCGGAGGAGAACCGACACTATCTGCGCGCCTTCATCCAGA
CATACAGGGATCTGCCCGTGCTGTGGGACACATCGCTGCGGGACTACACC
AATCGGGAGAAGCGGGCGGAGGCCTATCTGCGCCTGGTGCCCATATACCA
TTATCTCAAGCGGGACGCCACCGTGGAGGATGTGAAAAAGAAGATCAACA
CACTGCGCACGAACTACCGCAAGGAGCTAAAGGTGGGGGAGAGTGCCCTG
CGATCGGGCAGCCTCCAAAGTCCACGCTGCTGGACCTTTCAGGAGCTGGA
CTTTCTGCGCAACTCGGAGAAGATTCTAGCCGTCAATCCCGCCTTTAAGA
ACGAGCCCAACTTCTCCTTCGGTGAGAGCAACAATTGCCCGAGTGCGTTT
CTGGAGAGCCAGGGAGCAGCCCTCCATTATCCAGCACCGCGCGCTGGAGG
TCAGACGCCCAACATTTCCGAGATGTTTCACAAATCATTTGGAGCTCCGC
CCACCGCCACCGCCAGCAACCAACCATG

FMO04591.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:07:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG8281-RA 1301 CG8281-RA 145..706 16..578 2655 98.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:07:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7912607..7913168 16..578 2630 98.2 Plus
Blast to na_te.dros performed on 2014-11-28 22:07:45 has no hits.

FMO04591.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:38 Download gff for FMO04591.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8281-RA 145..706 16..578 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 11:00:50 Download gff for FMO04591.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8281-RA 145..706 16..578 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:47 Download gff for FMO04591.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8281-RA 145..706 16..578 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:47 Download gff for FMO04591.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 7912607..7913168 16..578 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:38 Download gff for FMO04591.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7905707..7906268 16..578 98   Plus