FMO04595.5prime Sequence
1027 bp (785 high quality bases) assembled on 2008-08-04
> FMO04595.5prime
ACATTATACGAAGTTATCAATCCACATGTCCGCGACCGCCTCAAATCGCC
AGCCGGTGCCAAAATTTCCGGCCGCCATGCCGCGTGGAACGGGCACAGTG
TGCTCCAATCCGGCGGTGCCCAAGTCGCCGGATGCCCTCACCTCCCTGGT
GGCCCGGAAGAGCATTACGTCCATGTCGGAGGAGGAGATCATTCAGGAGA
ATCTCAACGAGATCCTCGACCTCAAGTCGCGCGAGGAGCGAAAAGCCAAT
GGACGTCTGGTGGCTGTGATCGTCTGTTTTCTGGTGCTCTTCCTGGCTGT
CTACCATGCCTGCGTCCGGAAGTCGGAAAACTCGCTGGCTGGCGTCCTGG
TACCGGCGGGCATCATGCTCTCCTACGGGGCCTGGGTGGTCGTCCTGGCC
AAGAGGGACAAGCACAGGCGTGCCATGTTTGAGCGGCACATCAAGGAGGT
GACGCTAAAGAACAAAATCGAGCTGGAGGAGAAGCATGCGCGCCACGCGA
AGAAGGCGCAATCGCATCATGGTCACTCCGGCACCGATTCCACGGGCAGT
GCCTCCAGTTCGCTGCACTACGTCAACGAGCTGCTGCCCAACGGTGGCGG
TGAGCACCGCAAGAAGCAGCGACGCCATCGTCACAAGGAGCGCTCCGTGG
AGCGAGATGATCATCATCAACGTAGCCATCAGCGCTCGCATACGCCGGAC
ATTGGCGTGCATCGTGGAGCGCACAAAATGCCCAGTTTCCGGCAGAAGCT
CTTCGGTCAGACCATCGCCCATGTCAAACTGGTGGAGGCGCAGAGCGATA
GCACGGATTCAGCTGGCGCATCTGGTCCGGATCGATAATCAGGTCTCAGT
ACGTTCGCCAGTCCAGGTGGGCCAGCCCAGTGCTGCGGCCAGCTCAATCT
CCGGCGAGAAAAGTCAGCGACTACAGCGGCCTGAACAGATGCCAACTGAG
CGCAAGGAGGAGCTTGTCCACCTCGAATTCAGGCAAGCCTTTCTAGATCA
TTCTTTGGCCCGGCGGGCTCAGGTAGT
FMO04595.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32599-RA | 1233 | CG32599-RA | 143..1053 | 25..937 | 4185 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14245830..14246326 | 431..928 | 2120 | 96.4 | Plus |
| X | 23542271 | X | 14243828..14244036 | 25..233 | 1045 | 100 | Plus |
| X | 23542271 | X | 14245618..14245765 | 284..431 | 680 | 97.3 | Plus |
| X | 23542271 | X | 14245248..14245299 | 233..284 | 260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:16:47 has no hits.
FMO04595.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:21 Download gff for
FMO04595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32599-RA | 137..1064 | 18..948 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 10:59:52 Download gff for
FMO04595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32599-RA | 1..921 | 26..948 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:26 Download gff for
FMO04595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32599-RA | 137..1064 | 18..948 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:26 Download gff for
FMO04595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14243822..14244035 | 18..232 | 98 | -> | Plus |
| X | 14245248..14245299 | 233..284 | 100 | -> | Plus |
| X | 14245619..14245764 | 285..430 | 97 | -> | Plus |
| X | 14245830..14246345 | 431..948 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:21 Download gff for
FMO04595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14137855..14138068 | 18..232 | 98 | -> | Plus |
| arm_X | 14139281..14139332 | 233..284 | 100 | -> | Plus |
| arm_X | 14139652..14139797 | 285..430 | 97 | -> | Plus |
| arm_X | 14139863..14140378 | 431..948 | 95 | | Plus |
