FMO04607.5prime Sequence
1245 bp (1069 high quality bases) assembled on 2008-08-08
> FMO04607.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGGAAACACGG
ACTCCAAGTTGAACTTTCGCAAGGCGATTGTGCAGCTGACGCAGAAGAAC
CAGAAGATCGACCCCAGCGACGAGCAGTTCTGGGAGCAGTTCTGGCAGGG
CCACCAGACGACGCTGGAGGATGTGTTCGCGCTGGTCACCTCGAGCGAGA
TTCGCCAGATACGGAACGAGAATCCAGCCAACCTGGCCACCTTATGCTAC
AAGGCGGTGGAAAAGCTTGCCCAGGCGGTAGACAGCAGTTGTCGCACGCA
GGCGGAGCAGCAGTGCGTTTTGAACTGCGTGCGGCTGCTCGTCCGGTGTC
TGCCGTACATTTTCGAGGACGAAAAGTGGCGCGACTTCTTCTGGAGCAGC
CTGCCATCGCAGGACAAGACCATGCCGTTGGCTCAGTCACTGCTCAATGC
CACCTGCGACCTTCTTTTCTGTCCCGACTTCACGGTTACGGCCACGCGGC
GTGCGGGCCCCGAGAAGGCCGAGGAGTTGGCGAACATCGATAGCTGCGAG
TACATTTGGGAAGCGGGCGTGGGTTTCGCCCAGTCACCGCCCCACAACGC
CCACATGGAGCGCAGGCGCACGGAGTTGCTGAAGCTATTACTCACCTGCT
TCTCGGAGCCCATGTACCGATCGCCGCAGCAGTCCGAGGAGCCCAACAAG
TGGATAGCATATTTCACCTCGGCCGACAATCGCCATGCCCTGCCGCTGTT
CACCTCGTTTCTGAACACCGTGTGCTCCTACGATCCGGTGGGCTTCGGCG
TGCCCTACAATCACCTGCTGTTTGCAGACACCACAGAGCCCCTGGTGGAA
GCGTGCCTTCAACTGCTCATTGTCACCTTGGATCACGATATGGTGGTGCA
GCAGCAACTCACACAACCCGGACAGGCGTCCTACGACGAGGGCAATTGCG
GCGACAACTTGTTCATTAACTATCTTTCGAGGGTTCACCGCGACGAGGAC
TTTCACTTTGTGCTCAAGGCATAACCAGGCTGCTGAACACCCACTGGTCA
AGAACTATTTGCCCAATTCCACAAAGCGACTCATGCCACCAGGAGCTGCT
TATTTGTTTGGAAAATAGGCGACTACAACAAAAAGTTCTGTAATTTGTGG
CTAAGAGCTTCGAAGTTCTGGACTCTGATCGATCTGGTTCACTAACTAAC
TCCGAACCGATAACTACATCCTCGAAAAGTTGGGCCTGTTGTATG
FMO04607.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8841-RB | 3539 | CG8841-RB | 216..1358 | 38..1173 | 5420 | 98.8 | Plus |
| CG8841-RA | 3460 | CG8841-RA | 137..1279 | 38..1173 | 5420 | 98.8 | Plus |
| CG8841-RC | 3530 | CG8841-RC | 207..1349 | 38..1173 | 5420 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12324758..12325900 | 1173..38 | 5270 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:11:09 has no hits.
FMO04607.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:01 Download gff for
FMO04607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8841-RC | 207..1339 | 38..1163 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:29:33 Download gff for
FMO04607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8841-RC | 207..1339 | 38..1163 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:24 Download gff for
FMO04607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8841-RC | 207..1339 | 38..1163 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:24 Download gff for
FMO04607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12324758..12325900 | 38..1173 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:01 Download gff for
FMO04607.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8212263..8213405 | 38..1173 | 98 | | Minus |
