FMO04608.5prime Sequence
1190 bp (1035 high quality bases) assembled on 2008-08-08
> FMO04608.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGAACCGCTACGCGG
TAAGCTCGATGGTGGGGCAAGGATCCTTCGGGTGCGTATACAAGGCGACA
CGCAAGGACGACAGCAAGGTGGTGGCCATCAAAGTGATCTCCAAGCGCGG
AAGAGCCACGAAAGAGCTGAAGAATTTGCGCAGGGAGTGCGACATTCAGG
CCCGGCTGAAGCATCCGCACGTCATCGAGATGATCGAGTCCTTCGAGTCG
AAGACGGACCTTTTCGTGGTCACTGAGTTCGCGCTGATGGACCTGCACCG
CTACCTGTCCTACAATGGAGCCATGGGCGAGGAGCCGGCACGTCGGGTGA
CCGGGCATCTGGTGTCCGCTCTGTACTACCTGCATTCAAACCGCATCCTC
CACCGGGATCTCAAACCGCAAAACGTGCTGCTCGACAAGAACATGCACGC
GAAACTCTGCGACTTTGGACTGGCCCGCAACATGACCCTGGGTACCCACG
TGCTCACCTCGATCAAGGGAACGCCCCTCTACATGGCCCCGGAGCTGCTG
GCGGAGCAGCCGTACGACCATCATGCGGACATGTGGTCACTGGGCTGCAT
AGCCTACGAAAGCATGGCCGGTCAGCCGCCCTTCTGTGCCAGCTCCATCC
TGCATCTGGTGAAGATGATCAAGCACGAGGACGTCAAGTGGCCGAGCACG
CTGACTAGCGAGTGCCGCTCCTTCCTACAGGGCCTGCTTGAGAAGGACCC
CGGTCTGCGCATATCCTGGACGCAGCTGTTGTGTCACCCCTTCGTTGAGG
GACGCATCTTTATCGCAGAAACGCAGGCGGAGGCGGCCAAGGAATCGCCT
TTCACAAATCCCGAAGCCAAGGTTAAGTCGTCAAACAGTCCGATCCGGAG
GTAGGCGATCTGGACGAGGCCCTGCCGCTTTGGACTTTGGCGAGTCGCGA
CAGAAAACTTGACCACCTCCCGCGACAGCATAAACGCATGCTCCCAGCGA
TGTTGAGCATCTGAGACGATGTGGAGGACATATGCACGTGTGTCGTTCCC
TCGCGACTTGTCTACAGGAATCTGTTTGGTGTCGGCATGCGATGTACCAC
AGCGTGATCACTCGCACTGCTCGTCAGTGGCCACTCATGATCTAATCAAT
GAGCACCTCGCAACTCAAAGCTCTTGCCTGGACGAAGCCT
FMO04608.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fu-RA | 3251 | CG6551-RA | 85..1212 | 34..1136 | 4970 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18658021..18658894 | 144..1012 | 4140 | 99.3 | Plus |
| X | 23542271 | X | 18657839..18657950 | 34..145 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:45:40 has no hits.
FMO04608.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:19 Download gff for
FMO04608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fu-RA | 85..1157 | 34..1090 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:11:05 Download gff for
FMO04608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fu-RA | 86..1158 | 34..1090 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:12 Download gff for
FMO04608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fu-RA | 85..1157 | 34..1090 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:12 Download gff for
FMO04608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18657839..18657950 | 34..145 | 100 | -> | Plus |
| X | 18658023..18658983 | 146..1090 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:19 Download gff for
FMO04608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18551872..18551983 | 34..145 | 100 | -> | Plus |
| arm_X | 18552056..18553016 | 146..1090 | 98 | | Plus |
