FMO04613.5prime Sequence
711 bp (711 high quality bases) assembled on 2008-08-08
> FMO04613.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCTGCAGCAAAT
CAAGATGCTGGTGCTGGGCATCATCACGCTGTGCCGGCGTGCCTTGTGCT
GCTTCTCCAGGCGCCGCAAGCTCAGCCACAGCGGCTCCGCCACCGGATCC
GCCGACCAACTGCAAGCGGTCAACGTGATCGTGGAGCGAGGCGACTTCTC
CGCCACCGGCGCCACCTCCGCTGGCCAGGCCGGCGGTGGCAGGACAGCGG
GGGCGCGCGAGCGGGACTGGAACTCCTGGGACGACAGTCCGCGCACCGTG
GAGGAGCACATCGAGCAGTACCGCCAGCGAATGGCCCAGCCACCCACTCC
GCCCAAGGAGGAACCCGAACCGGACTTCTTCAGTGAGCTGACGCCCACCA
TCAAGCCGCAGATGAAGTTCTACCTGGAGGATCCATCCACGAGTGCGGCG
ACCAGCCAACAAAGTGACTTTTCAAGACTGCAGGCCCAGGACTTGGTGCC
AATTAGCGTAAATGCCGATCTCGAGGACTGGGTGGATGATAATGCCGGCG
GCTGGGAGGAGCTGGACACCTCCCAGACCAAGCACATTCTGCGTGAGAAG
CGTCGTGAGTTGCGCCATCAGCGACAGCCGCCCGTCCGCCCGGCCCCGCC
CACTGTGGGCGCTCAGCGACTGACCGCCGGACAGCGAGCGGCGGCAAGCT
TTCTAGACCAT
FMO04613.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32536-RA | 887 | CG32536-RA | 75..731 | 37..693 | 3285 | 100 | Plus |
| CG32537-RA | 2442 | CG32537-RA | 323..631 | 385..693 | 1545 | 100 | Plus |
| CG32537-RA | 2442 | CG32537-RA | 1..64 | 322..385 | 320 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19276476..19276824 | 385..37 | 1745 | 100 | Minus |
| X | 23542271 | X | 19275160..19275339 | 693..514 | 900 | 100 | Minus |
| X | 23542271 | X | 19275399..19275528 | 514..385 | 650 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:58:20 has no hits.
FMO04613.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:05 Download gff for
FMO04613.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32536-RA | 59..736 | 23..701 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:17:18 Download gff for
FMO04613.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32536-RA | 33..710 | 23..701 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:23 Download gff for
FMO04613.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32536-RA | 59..736 | 23..701 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:23 Download gff for
FMO04613.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19276477..19276840 | 23..384 | 98 | | Minus |
| X | 19275155..19275339 | 514..701 | 97 | <- | Minus |
| X | 19275400..19275528 | 385..513 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:05 Download gff for
FMO04613.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19169188..19169372 | 514..701 | 97 | <- | Minus |
| arm_X | 19169433..19169561 | 385..513 | 100 | <- | Minus |
| arm_X | 19170510..19170873 | 23..384 | 98 | | Minus |
