FMO04616.5prime Sequence
1156 bp (1023 high quality bases) assembled on 2008-08-08
> FMO04616.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCTTACCGGC
CGTCCAGTGAGAATGTCCGTTGCAGTAAACCAAAAAGGCTGGGGTAAGAA
GGCAGGAGCTTCCGTATCCGACTCCGCAATTCGTACACAGTCCGCCCTCA
GCGAGGGGGGTGGGGCCATTGACGTCCGGCCGATGGAGCACGACGAGGAA
ATCAATCGCGAAGATCTCAACCTCGACGAGGACGATGAGATGGAGGAGGA
GGAGGAGGAGGAGCACGCCGACGAAGAGGACGATGACGAGGAGCCGGATA
GCAACGAGAACAGCGCACCGGAGGAGCAAGTAGAGCCGCCGGCCTTCAGC
CTAGCGACGCTGGGACTCCAACGCGTGGGCAGCGCACCGCCGCCCAAGCC
CAAAGTCCAGAAGGCCCCAATCCCGACCCTAAATGCCCGTGGAATGCCTG
CTCGGATACGAAAGAGAAATCGTCTCTTTTATGACGAGAACATCATCAAC
GATGACAAGCCGCTGCGCATGAGCTTGGCACCCAAGAAGACGCCTGGCAG
ACCACCGCAGTCTGCCGGCGGTGGCTCTAGCCAGAAGATCCCGCTTACCC
CGTCTAAGGTGCTGAAGAAGCGCAAGGGAGTGGTCTCCCGCTACATGCGT
TCCAGTGAGCAGGGAACCAACTCCGTTTCGGCCAGCAATCAGCCCCAGCT
GTTGGGCAAGCACAAGAAGGCGACGCCATCGAAGAGCCAGTCGGTGGGCA
GCAAGCTGGGCTCCGGTGGACCGAAAACAGGGCGGGGTGCCCATTTCATT
GGAAAGGGTACCGCTGCAGCGGTGGCTGCAGTAGCAGCCGCCGAGGAGGA
AGCTAACCAGGCTGAGGCTGCAGCGCTGGCGAACAAGCGGTGGGCCAGTC
CATTGGTCTTCGGCTTGCGCAATTCTGCTCCAGTTGCCCAAAGCGCACAA
GTGGGCCATAGCCGAGTGGTTCTACTCGTACGTTGACAGCCCGCTATTCG
AATGCCGTGATGAGTTTATGAACCATGTGAATGACCTGGCAACATGCTGG
GCCACCGGAGCCTCATCGCCACGAGTGTTGATTATAAAGCGGAGATGGCC
AGGGCCGCGGCGAATGCTTCGCCAATTTTTCTACGCAGGAGCGCGAAAGG
AATGGC
FMO04616.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mip130-RA | 3459 | CG3480-RA | 115..1221 | 39..1144 | 5030 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1916976..1918013 | 41..1077 | 4815 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:57:46 has no hits.
FMO04616.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:46 Download gff for
FMO04616.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mip130-RA | 141..1198 | 39..1094 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:15:45 Download gff for
FMO04616.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mip130-RA | 111..1168 | 39..1094 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:45:37 Download gff for
FMO04616.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mip130-RA | 115..1172 | 39..1094 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:45:37 Download gff for
FMO04616.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1916974..1918065 | 38..1129 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:46 Download gff for
FMO04616.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1811007..1812098 | 38..1129 | 97 | <- | Plus |
