FMO04617.5prime Sequence
322 bp (322 high quality bases) assembled on 2008-08-08
> FMO04617.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAATAATGCGA
AAGCCATTTTAGAGGGTCCGAGACAACGGCGAAGAAAGGAGAAAGAAAGG
CCGACCGCTGTGATAATACCCGATGCTCCAAAACAAATTAGCATAATCAA
GGCGCCTGCCCAATGGCTGACCATTGAGAGATACATACATCTATTGAGAA
AAAAACGCACTTTTGTGCCGCGATCATTAACGCGATCAAATGCAAATGAG
GCGACATCAGTCAAGCGGCCGAAAGCGAAATGTGCAGCAGCATCATCAGC
TCGAGCAAGCTTTCTAGACCAT
FMO04617.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42445-RA | 1043 | CG42445-RA | 133..399 | 38..304 | 1335 | 100 | Plus |
| CG42445-RB | 1062 | CG42445-RB | 235..490 | 49..304 | 1280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8155325..8155580 | 304..49 | 1280 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:34:29 has no hits.
FMO04617.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:29 Download gff for
FMO04617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42445-RA | 127..406 | 30..313 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:14:17 Download gff for
FMO04617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7498-RA | 99..378 | 30..313 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:01 Download gff for
FMO04617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42445-RA | 127..406 | 30..313 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:01 Download gff for
FMO04617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8155318..8155587 | 42..313 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:29 Download gff for
FMO04617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8148418..8148687 | 42..313 | 97 | | Minus |
