FMO04632.5prime Sequence
1217 bp (1052 high quality bases) assembled on 2008-08-08
> FMO04632.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCTCGTCACGA
GAAAACGAAATCCACGGGCGGCGGGCTCCTGGACAGTCTGTTCGGAAGAC
CCTCGAAGTCCAAGGGAGGAACCATCAGCAGTGGCACCCTGGCCCATGGC
GGACGACCCGTGTCCGCGGACAACTATGTGGTGCCGGGCGTGGAGGACTT
TGAGCAGTACATCCAGCAGCTAAGCGTTGCGGAGCTGGATGCGAAGTTTC
TGGAGATCATCGAGGACATGAACATTCCGAAGGACAAGAGGGAGCCCCTG
TTGGCCAAATCGAAGGAGGAGCGACAGAAGATGATTATGTGGCACTTGAA
AGGTAAAAACTCACTGGAGCGTAGCGCCAACTCCCGCTTCGAGAAGCCCA
TAGACTATGTGGAATACCTGCAGAATGGGGAGCACAGCACGCACAAGGTG
TACCAATGTGTGGAATCTCTGCGCGTGGCGCTCACCAGCAATCCGATCTC
GTGGATCAAGGAGTTTGGAGTGGCGGGCATCGGGACGATTGAGAAGCTGC
TGGCCCGGTCAAAGAATAATGCCAGCTACGAGAAGATCGAGTTCGAGGCG
ATTCGGTGCCTGAAGGCGATCATGAACAACACATGGGGTCTGAACGTGGT
GCTCAATCCGGATCAGCATAGTGTGGTGCTGCTGCTGGCGCAATCCCTGG
ATCCCCGGAAGCCGCAGACGATGTGTGAAGCCCTCAAGCTGCTGGCCTCG
TTCTGCATTGTCTATGAGCGGAATGGCTACGAGAAGGTTCTCCGAGCCAT
AACCACTATTGCAGCCACATCCTTTAAAGCGAGCGAGCGCTTTCGACCCA
TAGTGGATGCCTTGTTTGCATCGGATCAGCACGATCCCAAACGGGACTTG
GCATGCCACAGCCTGATTTTTATTATACTCTCACCAATACCCCCACGGAT
TTGAACTTCCGCCTGCACTTGCGATGTGAGATTATGCGCATGGTCTATAC
GATCGCCTAGATGAGTTCACAAATCGTGAGCCAGCAATATGAGACCTGCA
GCAGCACTCAGATCTTCACGAGATCCGCGAGGATGACTCGAGGGAGTTGT
GCACGGCTTCGATTATGTCACCTCCACATTGACGACGCCACCGGAATTGC
TCAATGCTGAGAACCTGGTGACTGAACACTCGGCACTACACTCTGGTCCA
ACCCGTGCGCGACAGCA
FMO04632.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dia-RE | 5260 | CG1768-RE | 522..1675 | 37..1175 | 5185 | 97.6 | Plus |
| dia-RD | 3797 | CG1768-RD | 160..1313 | 37..1175 | 5185 | 97.6 | Plus |
| dia-RB | 4465 | CG1768-RB | 244..1397 | 37..1175 | 5185 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20763495..20764300 | 351..1143 | 3320 | 97 | Plus |
| 2L | 23513712 | 2L | 20760526..20760846 | 37..357 | 1605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:57:04 has no hits.
FMO04632.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:18 Download gff for
FMO04632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dia-RB | 244..1404 | 37..1187 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:11:06 Download gff for
FMO04632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dia-RB | 22..1182 | 37..1187 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:45:13 Download gff for
FMO04632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dia-RB | 244..1404 | 37..1187 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:45:13 Download gff for
FMO04632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20760524..20760841 | 34..352 | 99 | -> | Plus |
| 2L | 20763497..20764341 | 353..1187 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:18 Download gff for
FMO04632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20760524..20760841 | 34..352 | 99 | -> | Plus |
| arm_2L | 20763497..20764341 | 353..1187 | 96 | | Plus |
