FMO04645.5prime Sequence
1193 bp (948 high quality bases) assembled on 2008-08-08
> FMO04645.5prime
TCGTATAGCATACATTATACGAAGTTATCAATCGACATGTTTCGGTCGTG
TGTGCCCAAGGCGATTACCTCTAGTCGCTGTTTCGCGCGGATGTACTCGA
AGGACGTGCGCTTTGGCTCCGGAGTACGGGCAATGATGATCCGGGGCGTT
GATATTCTGGCTGATGCCGTTGCTGTGACCATGGGGCCCAAGGGTCGCAG
TGTGATCGTGGAGCGACCATGGACCTCGCCGAAGATCACCAAGGACGGCT
TCACGGTCGCGCGCTCGATTGCCCTAAAGGACCAGCACATGAATCTGGGC
GCCAAGTTGGTCCAGGATGTGGCCGATAATACGAATGAGTCGGCGGGTGA
CGGCACGACCACAGCAACAGTTTTGGCTCGAGCGATTGCCAAGGAAGGAT
TCAATCAGATTACCATGGGGGCTAATCCCGTGGAGATTCGTCGAGGTGTC
ATGTTAGCTGTTGACGTCGTAAAGGACAAGCTGAAGGAAATGTCCAAGGC
AGTGGAAACGCGTGAGGAGATCCAACAAGTAGCCACCCTCTCCGCGAACG
GGGATACTGAAATTGGGCGGCTCATTGGTGAGGCCACCGACAAAGTGGGT
CCAAGAGGAACTATTACTGTAAAGGATGGCAAGCGCCTGAAGGACGAGCT
AAATATTATCCAGGGCCTGCGCTTCGACAACGGCTATGTGTCGCCCTTTT
TCGTAAACAGCTCCAAGGGGTCCAAGGTGGAGTTTGCCAACGCCCTTGTA
ATGATATCCCTGAAGAAGATCACTGGACTCTCGCAAATAGTTAAAGGTCT
GGAGCAATCCCTGAGGCAGCGTCGTCCCCTGATCATCATAGCCCGAGGAC
ATCAGCGGGGAAGCCCTCAATGCTTTGGTCCTGAACAAGCTCAGTTGGGC
CTCCAGGTGTGCGCCGTCAAATCGCCAGCTATGGACACACCGCATGAGCA
TTATAGGCGATATATCCGCTGCCACGGGAGCACTATTTCGGCGATGACTC
AACTATTCAAAATGCAGAGGCTAAGCTGACGATCTGGTCAAGGTGGCGAG
GCTGTGGATAGCAGGACAGCACATGCCTCTGCAGGCAACCCAAGACAGGA
ACTTTGCAATGCCATCAGCTAATCAGTATGAACTGCGTAAAGCATTCAGC
GAACAGCGGTATCGTCTTGCGCCGTAAGTCTCTTCTCTGACCC
FMO04645.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp60B-RA | 2203 | CG2830-RA | 147..1262 | 37..1135 | 4840 | 96.8 | Plus |
| Hsp60-RB | 2328 | CG12101-RB | 193..579 | 100..486 | 615 | 77.3 | Plus |
| Hsp60-RA | 2357 | CG12101-RA | 222..608 | 100..486 | 615 | 77.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 728508..729455 | 37..982 | 4470 | 99.1 | Plus |
| X | 23542271 | X | 11110110..11110496 | 100..486 | 615 | 77.3 | Plus |
| 2L | 23513712 | 2L | 5669058..5669388 | 128..458 | 425 | 75.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:57:14 has no hits.
FMO04645.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:24 Download gff for
FMO04645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp60B-RA | 143..1241 | 29..1116 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:12:12 Download gff for
FMO04645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp60B-RA | 93..1191 | 29..1116 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:45:18 Download gff for
FMO04645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp60B-RA | 143..1241 | 29..1116 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:45:18 Download gff for
FMO04645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 728504..729602 | 29..1116 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:24 Download gff for
FMO04645.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 728504..729602 | 29..1116 | 96 | | Plus |
