FMO04651.5prime Sequence
736 bp (736 high quality bases) assembled on 2008-08-08
> FMO04651.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGATTACGCCGA
ATCCGTATTCCTTTAGTGGCAACATTTCCATCAGCAGTTGTCCAAGTGAA
GATGTATCATTTTCGGAAAGCATCCTAGAGGACAACGGACGCATTTCGCT
GGCCTATGAGAACCTGAAGACAATTCCGCGGCGACTGGCCGACAAATTCG
CAGCGCAGACCAAGTTTCTCGATTTGAGTCACAATGATTTCCGAAACTTG
AGATTTCTCTCCTTTTTCGAGGATCTGGACACTTTAATCCTGGACCGCAA
CGTAAACCTGGACATAAACACTTTTCCTTATTTGCCGAGCTTAAGGATCT
TGTGGATCAACAATTGCGATATAGCAAATATAACCGATTGGATACACCGC
ATCGAACGGCACTGTCCTGCGCTGGATCAGCTCTCTTGCATGGGGAATCC
TGGCATCCGCACAGTTTTCGGGGGCCAAGGACCCCGCGAGTATATACTAC
AGGTGCTTCCCCAGCTAAAATATCTCGATGGACTTCCAACCAGCAGGAAT
GCAGCTTATGCGACGCTGTCTTCCTCACAAGGACAGGGTCCGGACTCCAC
GAGCAATTCGGAAAAGCCTCCACTCGCATCCGCATTCACTTTCAAGGACA
TCATCCGTCCAAAGTATTCCAGAAAATCGCACAGCGGACGGATGTTTGGC
AACGGCTCCTCCACAAACGCAAGCTTTCTAGACCAT
FMO04651.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31274-RB | 1399 | CG31274-RB | 281..961 | 38..718 | 3405 | 100 | Plus |
| MESK4-RB | 1488 | CG31447-RB | 271..951 | 38..718 | 3405 | 100 | Plus |
| MESK4-RA | 1390 | CG31447-RA | 271..951 | 38..718 | 3405 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16989518..16989882 | 354..718 | 1825 | 100 | Plus |
| 3R | 32079331 | 3R | 16993730..16994094 | 354..718 | 1825 | 100 | Plus |
| 3R | 32079331 | 3R | 16989138..16989455 | 38..355 | 1590 | 100 | Plus |
| 3R | 32079331 | 3R | 16993350..16993667 | 38..355 | 1590 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:11:40 has no hits.
FMO04651.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:09 Download gff for
FMO04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESK4-RB | 271..956 | 38..723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:17:21 Download gff for
FMO04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31274-RB | 160..845 | 38..723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:34 Download gff for
FMO04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MESK4-RA | 271..956 | 38..723 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:34 Download gff for
FMO04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16989138..16989454 | 38..354 | 100 | -> | Plus |
| 3R | 16989519..16989887 | 355..723 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:09 Download gff for
FMO04651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12814860..12815176 | 38..354 | 100 | -> | Plus |
| arm_3R | 12815241..12815609 | 355..723 | 99 | | Plus |
