FMO04671.5prime Sequence
320 bp (320 high quality bases) assembled on 2008-08-08
> FMO04671.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCCGATTTT
GAGAACCTTTCCGGCAATGACAAGGAGCTGCAGGAGTTCCTCTTGATTGA
GAAACAGAAGGCACAGGTCAACGCGCAGATACACGAGTTCAACGAGATCT
GCTGGGAGAAGTGCATCGGCAAGCCGAGTACCAAGCTGGACCACGCCACC
GAGACGTGCCTGAGCAACTGCGTCGACCGATTCATCGACACGTCGCTGCT
TATCACCCAGCGGTTCGCTCAGATGCTCCAAAAGCGAGGTGGCGGCGACC
TGGCAAGCTTTCTAGACCAT
FMO04671.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tim8-RB | 761 | CG1728-RB | 92..355 | 39..302 | 1320 | 100 | Plus |
| Tim8-RA | 661 | CG1728-RA | 92..355 | 39..302 | 1320 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11368701..11368877 | 126..302 | 885 | 100 | Plus |
| X | 23542271 | X | 11368536..11368625 | 39..128 | 450 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:32:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 3256..3287 | 143..174 | 106 | 81.2 | Plus |
FMO04671.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:17 Download gff for
FMO04671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tim8-RA | 84..362 | 29..311 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:12:42 Download gff for
FMO04671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tim8-RA | 68..346 | 29..311 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:35 Download gff for
FMO04671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tim8-RA | 84..362 | 29..311 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:35 Download gff for
FMO04671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11368704..11368884 | 129..311 | 97 | | Plus |
| X | 11368528..11368625 | 29..128 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:17 Download gff for
FMO04671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11262561..11262658 | 29..128 | 96 | -> | Plus |
| arm_X | 11262737..11262917 | 129..311 | 97 | | Plus |
