FMO04675.5prime Sequence
483 bp (483 high quality bases) assembled on 2008-08-08
> FMO04675.5prime
ACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGCAATGG
TCCCCAGCTAACAGAGGAAGATCTTAAACGAGACGCAGGACTCACTGGTG
GCCAGGAGTATTGTGAAGTCTATGTGCTTGTAGACAACGATACTGATCAG
GCGATTGGGTACTCCATTTGCTACAAGGCATACTCAACGTGGCAGGGACG
GTACTTCTTCGTCGAGGACATCTATGTCCGCCCCGAGCACCGTAAACGCG
GCGCCGGAAAGCGAATCTTCTTGGAGGTTGCATCGCGGGCTGTAGAGCTT
CAGTGCCCTCGCCTGGAGTTTAATGTACTGGAATGGAATCCTGCACGCAA
GTTCTACGAAAGTCTTGGTGCCGTGGATTTGACAGATAAAGAGGGCTGGC
ACTACTACCGCGTGGAGGAGCAACAACTGGCCAAATTGGCCGCGGATCTG
AGGGCAAAAAAATCTGCAAGCTTTCTAGACCAT
FMO04675.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:30:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4210-RA | 682 | CG4210-RA | 156..581 | 40..465 | 2130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:30:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15214426..15214744 | 147..465 | 1595 | 100 | Plus |
| 3R | 32079331 | 3R | 15214288..15214365 | 69..146 | 390 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:30:48 has no hits.
FMO04675.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:14 Download gff for
FMO04675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4210-RA | 151..587 | 33..473 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:11:09 Download gff for
FMO04675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4210-RB | 213..649 | 33..473 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:59 Download gff for
FMO04675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4210-RA | 151..587 | 33..473 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:59 Download gff for
FMO04675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15214290..15214365 | 71..146 | 100 | -> | Plus |
| 3R | 15214426..15214750 | 147..473 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:14 Download gff for
FMO04675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11040012..11040087 | 71..146 | 100 | -> | Plus |
| arm_3R | 11040148..11040472 | 147..473 | 99 | | Plus |
