FMO04677.5prime Sequence
591 bp (591 high quality bases) assembled on 2008-08-08
> FMO04677.5prime
ACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCAGTTC
CGGAGGAGGAGCCGGCAATGGCGTTCCGGATAGACTGCCTCCGATCAACG
TAAAGGACCAACGCTTCCCCTACTGCATCGTTTGGACTCCCATTCCGGTT
CTCACCTGGCTGATGCCCATGATCGGACATATGGGCATTTGCACTTCGTC
CGGTGTGATTCGTGACTTCGCCGGCCCCTACTTCGTATCAGAGGACAACA
TGGCGTTTGGAAGACCCACCCGGTACATAAGGTTGCATCCCAAGCACATG
GTGGGCGGCAGTTACGCCTGGGACGAGGCGGTCTCCAAAGCATCTGTGCT
CTACGGCACCCGCATCCACAATATCTTCTGTGACAACTGCCACTCGCATG
TGGCAACGGCACTCATCTACATGCGCTACTACGACAGCACCGCATGGAAC
ATGATTATCCTCAGCATGTGGCTCTTTGTCTGCGGCCGCTACGTCGGAAT
AGGGGGTTTTATTAAGACCTGGCTGCCGTTTGCCATTCTCCTGTCCATCT
TCACCATTCTGGGCATCTATTTTGCAAGCTTTCTAGACCAT
FMO04677.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8372-RA | 790 | CG8372-RA | 174..707 | 40..573 | 2640 | 99.6 | Plus |
CG8372-RB | 864 | CG8372-RB | 248..781 | 40..573 | 2640 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:10:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8212122..8212655 | 573..40 | 2640 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:10:53 has no hits.
FMO04677.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:16 Download gff for
FMO04677.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8372-RB | 242..788 | 30..581 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:11:43 Download gff for
FMO04677.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8372-RB | 221..767 | 30..581 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:13 Download gff for
FMO04677.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8372-RB | 242..788 | 30..581 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:13 Download gff for
FMO04677.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8212115..8212661 | 30..581 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:16 Download gff for
FMO04677.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8212115..8212661 | 30..581 | 98 | | Minus |