FMO04678.5prime Sequence
786 bp (786 high quality bases) assembled on 2008-08-08
> FMO04678.5prime
ACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGGAGAA
AAAGGGTGCGCTAAAAGTAATCCCGTCCGCTTCGGAGGAGCAACTTGTCC
AGGCCCTGGGCGATCTTCTCCAGCGCTGCTCCCAGGAGGCGCTGGCCAAA
CATGATAAGTTCAGCGTGGGACTTTCGGGTGGTTCCCTCGTCCAGTTGCT
AACGAAAGCCCTGAAATCGTGCAACTTAAAAACGGCCAAATGGGTGTTTT
TCTTCTGTGACGAGCGGTATGTTCGCCTGGATGACAGCGATTCCACCTAT
GGTGCCTACAGGGCCGAGTGGCTAACCCAATTGCCCTGCATCCAGGAATC
CCAGTTCGTCCGCGCCGATACCAGCCAACCGCTGGACGCCTGCGCCGCAG
ATTACGAGGCGAAGGTCAAAAGTCAAGTCGATCGCTTCGATCTGCTGCTG
CTTGGCATGGGACCCGATGGCCACACCTGCTCCCTCTTTCCCGAGCAGCC
AGCCACCCTGCAGGAGACCAAGCGCCTGGTTATCCCCATCCGGAACTCGC
CCAAGCCGCCTCCCGAGCGGATCACTTTCACCCTGCCGCTGATCAATAAG
GCACGGAATGTCGCCTTCGTGGTTACGGGCGCCGCAAAAGCCAGTGTCGT
CAAGAGTGTGTTTGTCGATCTGGACAAGAAGTTTCCCGCTGCGTGGGTGA
ATCCGACCAAAGGGCAGTTGACATTGATTGTGGACGCGGGTGCTGGAAAA
GAAATTGAAACCTTAAAAGCAAGCTTTCTAGACCAT
FMO04678.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17333-RA | 847 | CG17333-RA | 63..791 | 40..768 | 3645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10847769..10848245 | 178..654 | 2385 | 100 | Plus |
| X | 23542271 | X | 10847500..10847640 | 40..180 | 705 | 100 | Plus |
| X | 23542271 | X | 10848363..10848478 | 653..768 | 580 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:24:54 has no hits.
FMO04678.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:18 Download gff for
FMO04678.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17333-RA | 53..791 | 30..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:17:03 Download gff for
FMO04678.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17333-RA | 1..732 | 40..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:52 Download gff for
FMO04678.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17333-RA | 53..791 | 30..768 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:52 Download gff for
FMO04678.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10847490..10847638 | 30..178 | 97 | -> | Plus |
| X | 10847770..10848245 | 179..654 | 100 | -> | Plus |
| X | 10848365..10848478 | 655..768 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:18 Download gff for
FMO04678.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10741523..10741671 | 30..178 | 97 | -> | Plus |
| arm_X | 10741803..10742278 | 179..654 | 100 | -> | Plus |
| arm_X | 10742398..10742511 | 655..768 | 100 | | Plus |
