FMO04680.5prime Sequence
246 bp (246 high quality bases) assembled on 2008-08-08
> FMO04680.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGAGTCTTCCTG
CAAATCCTGGCTGTTGTGCAGCATCCTGGTGCTTGTGGCCTTTTCGTTGG
GTACGTATTTTGGGCTACGAAGAAGAAGACTGCCACGCCCCCTTTCGGGC
AAGGGCCGTTATGTAATCGTAAAGGAAAGAAATGCAAATGAAGGCCTAAA
AACTCTGTTAACTCTGCTAACCGTTTCTGCAAGCTTTCTAGACCAT
FMO04680.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nAChRbeta1-RB | 818 | CG11348-RB | 240..432 | 36..228 | 965 | 100 | Plus |
| nAChRbeta1-RA | 2460 | CG11348-RA | 240..304 | 36..100 | 325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4429651..4429843 | 36..228 | 965 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:23:38 has no hits.
FMO04680.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:00 Download gff for
FMO04680.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nAcRbeta-64B-RB | 240..432 | 36..228 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:11:11 Download gff for
FMO04680.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nAcRbeta-64B-RB | 211..403 | 36..228 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:26 Download gff for
FMO04680.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nAChRbeta1-RB | 240..432 | 36..228 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:26 Download gff for
FMO04680.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4429651..4429843 | 36..228 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:00 Download gff for
FMO04680.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4429651..4429843 | 36..228 | 100 | | Plus |
