FMO04686.5prime Sequence
813 bp (813 high quality bases) assembled on 2008-08-08
> FMO04686.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGTGTCCCGAGATGTC
GTCCGTGAAAATCCTGGCCTCGCTGGCCATGATCGGTTTATTGGTTTTGT
CTCCTGCGGAGGGTATCAGCCGACCATTGCCTCCATACGTGGGTCTGCCC
ACCCAGGATGGCCTCACGCGTCTGTTCCTTAATTCACGGGTCACGCAGAC
AGATCCCTTCGCCTCGGTGGCATGTTTCGGTGGCTACATCGGTGAATCCA
ACCTGATCGCGGAGCTGTACAGTGCCAACTACACCAAATGCTACAATGCG
GCGGCGGACTCCAGGAAGGGTATCGATGCCGACTTCCTGGCCACTCGCCG
GACTATCCGACTTTCATCCGAAAGAGTTTGCAGCGAGCTCAGGGCTTGCA
ACGAGCTCAACACAACCCTCGAATCCTTTCAATGTCATGCCAATGTGGGC
TCCAACAACACTGTCTCCACATACAGCATCTCGGGTAACGCCTCGGAGTC
GGCCAGCGTGCTGGAGGAACGCTACCGAGTGGTAGATCTGCGCCATGGGC
AGTGCTGCCAGAGGGCGGAGCGGCACTACGTGGAGTCCACTGCCAGGAAC
TACAACTACCTGCAGGCCTGTCTGGATGGTCGCGCTAAGCCGAAGCCCAT
GCCCAAGCCCACATCCACGACCTCCACATCGACCACCACCACCACCACTA
CCACGACCACCGAGGCACCCACCGAACCACCAACCACCACCGAGGCACCT
TTAAACGTCGAAGATCAGTTCAAGCAGCTTTTGAATTTGTTAAACGCAAG
CTTTCTAGACCAT
FMO04686.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:34:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16762-RA | 885 | CG16762-RA | 21..782 | 34..795 | 3810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:34:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2475180..2475594 | 448..34 | 2075 | 100 | Minus |
| 3L | 28110227 | 3L | 2474770..2475118 | 795..447 | 1745 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:34:57 has no hits.
FMO04686.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:09 Download gff for
FMO04686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16762-RA | 13..785 | 23..799 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:12:47 Download gff for
FMO04686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16762-RA | 1..765 | 34..799 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:55 Download gff for
FMO04686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16762-RA | 13..785 | 23..799 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:55 Download gff for
FMO04686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2474767..2475117 | 448..799 | 99 | <- | Minus |
| 3L | 2475181..2475602 | 23..447 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:09 Download gff for
FMO04686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2474767..2475117 | 448..799 | 99 | <- | Minus |
| arm_3L | 2475181..2475602 | 23..447 | 99 | | Minus |
