FMO04690.5prime Sequence
750 bp (750 high quality bases) assembled on 2008-08-08
> FMO04690.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCGCTGGTGGA
TCACGATTCCTGGGACATCGAGTACGAGGGCTGCGAGCGACTGCGGCATC
AGCTGCTGGTATACCTCAACCAGCGGCAGCAGCTCAATCCGAGGACGAGC
CAGTTCGTCCAACTGACAAGCAGCATTCAGACGGGAATAGAGCAGCTGGC
CAAGGACATGAAGCACCTCAAGGTGGTGCTGGACAACGCCATCACCTGGG
AGACGAGCCCGGAGGAGGAGCTGCAACAGCGGCGCATCGACTGGGATAGA
CTTACTTCGCAGCTGCGCGAGATCCGCGAGAAGTTCGCAAACAGTAGCCG
CTCCAATGTCCCGGCCGCATCCGGTTCTGCTTGGCAGGATCAGGATCTCG
GCCCAGGTCACAGCAATTCCTCGCGGAATACCGCCTTGGATGTGGAGGCT
CTGAAGCAGAAAAAGACCGAGATGCTGGCGCAGCAGAACGAAGGACTCGA
GGTTCTATCAGCCACATTGTCCAGACAGCGCCAACTGGCCACACAGCTGG
GCAACGAGGTGGAGGACCAGAACAATATCCTTGACAACTTGGCCAATGCC
ATGGACCGTGTGGAAACGGGTGTGCAGCGGGAAACACAGAGCATTGGACA
GGTTAACCGGCGGGACAGTACCTGGGGCTACTGGCTCGTCATCATAGCCT
TGTTCGTCGCCATCATTGTCGTGGTCTTCGTCGCAAGCTTTCTAGACCAT
FMO04690.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syx8-RA | 897 | CG4109-RA | 80..775 | 37..732 | 3480 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16586441..16586978 | 574..37 | 2690 | 100 | Minus |
| 3L | 28110227 | 3L | 16586230..16586387 | 732..575 | 790 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:31:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BS4 | 754 | BS4 BS4 754bp | 91..126 | 207..169 | 107 | 79.5 | Minus |
FMO04690.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:51:36 Download gff for
FMO04690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx8-RA | 73..780 | 29..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:16:33 Download gff for
FMO04690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx8-RA | 115..820 | 29..733 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:15 Download gff for
FMO04690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx8-RA | 73..780 | 29..739 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:15 Download gff for
FMO04690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16586225..16586387 | 575..739 | 98 | <- | Minus |
| 3L | 16586441..16586985 | 29..574 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:51:36 Download gff for
FMO04690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16579325..16579487 | 575..739 | 98 | <- | Minus |
| arm_3L | 16579541..16580085 | 29..574 | 99 | <- | Minus |
