FMO04692.5prime Sequence
864 bp (325 high quality bases) assembled on 2008-08-08
> FMO04692.5prime
TCGTATAGCATACATTATACGAAGTTATCAATCCACATGTCGCTATACTT
TGCGTTTCTCACGACACTGATAATCAGCCTTGTGAATAGTCGATACTTTA
ACTACAATCAGATACGACGTGAAACATATGGCACTAATCCCAGAGCGACA
TTTCCCTGGGTGGTTTCTGTGCTCGACCAGAGGGATTGGCTGTTTCGCTA
TATAGGAGTGGGATCTCTGATTAATCCAAATGTGGTCCTTACTGCCGCTC
ATATTCTGAATGGAACAACCAAGTATGATCTGGTGGTGCGAGCTGGCGAA
AGGGATACCTCGACTACAGCTGACCAGCAGCACGTGGATCTCGAGGTGCT
GAATATAGTCTCCCATGAACAGTTCAGCAGATTCCATGCCGAAAACAACA
TGGCGTTACTCATTCTGGTATCCGAATTTGATATGACAGCCAACATTAAT
TTAATCCCATTGTACCTACAAGAAGCTGGTATTCAAAAAGGATCCTGCTT
CTTCAACGGCTGGAGAAAAGTATATTTGAACTCCACGGACTACCCCACCG
TTCTCAAGACGGTCCAGGTCGATCTTTTGAGCATGGGTATGTGTAGCTCT
CGAAAGCTGCCCATCCAGCAAATCTGTGGGAAAGGTCTGGAAGGCATAGA
TTGCAGTGGAGACGGTGGGGCTCCTCTGGTTTGTCGGATACTTACATATC
CATATAAGTACGCACAGGTGGGCATTGTGAACTGGTTAAGTCAAAAGCCT
GTCGAAAATACATTTCATCGTCTTTACGATTGTAGCTGGTCTGCTCCCTT
GGATTGACTACCATTTAAACTTGAAGCGAACTTTCGTCGCACAAGTGCGA
GCTTTCTACACCAT
FMO04692.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4259-RB | 1867 | CG4259-RB | 31..840 | 37..846 | 3810 | 98.2 | Plus |
| CG4259-RA | 964 | CG4259-RA | 31..840 | 37..846 | 3810 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2128336..2129073 | 846..109 | 3415 | 98.1 | Minus |
| 2L | 23513712 | 2L | 2129133..2129207 | 111..37 | 360 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:22:49 has no hits.
FMO04692.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:39 Download gff for
FMO04692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4259-RA | 31..843 | 37..850 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:14:21 Download gff for
FMO04692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4259-RA | 1..817 | 36..850 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:48 Download gff for
FMO04692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4259-RA | 31..843 | 37..850 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:48 Download gff for
FMO04692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2128333..2129070 | 112..850 | 97 | <- | Minus |
| 2L | 2129133..2129207 | 37..111 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:39 Download gff for
FMO04692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2128333..2129070 | 112..850 | 97 | <- | Minus |
| arm_2L | 2129133..2129207 | 37..111 | 98 | | Minus |
