FMO04695.5prime Sequence
855 bp (855 high quality bases) assembled on 2008-08-08
> FMO04695.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGAGGCGAAAAT
GAATTTACATGTGTGCGCCTTAGCGCTGCTGCTGTTCGGCAGCATCGCCA
CTGTCCGCGGAAGAGCCGTGGACCTGGTAGACGATAGCAACGACGTGGAT
AACTCCATCGAGGCGGAGGAGGAGAAGCCACGCAACCGAGCCTTCGAAGC
CGACTGGCTCAAGTTCACCAAGACGCCGCCGACGAAGCTGCAGCAGGCCG
ATGGAGCCACCATCGAGATCGTTTGCGAGATGATGGGCTCCCAAGTGCCC
AGCATCCAGTGGGTGGTGGGTCACCTGCCCCGCTCGGAGCTCGATGATCT
GGACTCCAACCAGGTTGCCGAAGAGGCGCCCAGTGCCATTGTGCGCGTCC
GATCGTCGCATATCATCGACCACGTGCTGAGCGAGGCCCGCACCTACACG
TGTGTGGGACGCACTGGCTCCAAGACCATCTATGCCAGCACTGTGGTGCA
TCCTCCTCGCTCCTCTCGTCTGACGCCGGAGAAGACCTACCCGGGTGCCC
AGAAACCGCGAATCATCTACACCGAGAAGACGCATCTGGACCTCATGGGC
TCCAACATTCAGCTGCCCTGCCGCGTGCACGCCCGTCCCCGCGCCGAGAT
CACCTGGTTGAATAACGAGAACAAGGAGATCGTCCAAGGACATCGCCACA
GGGTGCTGGCCAACGGCGATCTTCTGATCTCCGAGATCAAGTGGGAGGAT
ATGGGCAACTACAAGTGCATAGCCCGCAACGTCGTCGGAAAGGATACCGC
CGATACCTTCGTGTATCCCGTACTTAATGAGGAAGACGCAAGCTTTCTAG
ACCAT
FMO04695.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL2-RC | 989 | CG15009-RC | 59..859 | 37..837 | 4005 | 100 | Plus |
| ImpL2-RD | 2355 | CG15009-RD | 729..1521 | 45..837 | 3965 | 100 | Plus |
| ImpL2-RB | 1651 | CG15009-RB | 729..1521 | 45..837 | 3965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4224927..4225707 | 825..45 | 3905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:32:00 has no hits.
FMO04695.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:06 Download gff for
FMO04695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RC | 59..870 | 37..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:11:45 Download gff for
FMO04695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RC | 59..870 | 37..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:26 Download gff for
FMO04695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RC | 59..870 | 37..849 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:26 Download gff for
FMO04695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4224927..4225707 | 45..825 | 100 | == | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:06 Download gff for
FMO04695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4224927..4225707 | 45..825 | 100 | == | Minus |
