Clone FMO04696 Report

Search the DGRC for FMO04696

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:46
Well:96
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG31451-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04696.5prime Sequence

309 bp (309 high quality bases) assembled on 2008-08-04

> FMO04696.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGATTTTGCTTTA
CGATTCGACCCACTATCATCCCAGATTGCGTAGCCTCCGGCGTCCTTGGC
GACGCGACGTCGTCGTCCGGACCATCCTCCAGCACGCCTTCCAAAATTGG
CGTTCACTGGATCGATTAGCCCCCAGCAAATTGAATCGCAGCCCGCAGGA
GATTTGGTTATTATCGCCTCATTTCGTACAAAGAGAAACCGCAACAAGGA
AACACTGCACATCGTTTTTTACACCCTTGCGTTATGTTTTTGCAAGCTTT
CTAGACCAT

FMO04696.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:06:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:06:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23984150..23984404 37..291 1275 100 Plus
Blast to na_te.dros performed 2014-11-28 22:06:54
Subject Length Description Subject Range Query Range Score Percent Strand
diver2 4917 diver2 DIVER2 4917bp 818..853 100..65 108 77.8 Minus

FMO04696.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 11:01:56 Download gff for FMO04696.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31451-RA 805..1063 37..295 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:24 Download gff for FMO04696.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 23984150..23984408 37..295 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:24 Download gff for FMO04696.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 23984150..23984408 37..295 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:18 Download gff for FMO04696.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19809872..19810130 37..295 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:18 Download gff for FMO04696.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19809872..19810130 37..295 99   Plus