Clone FMO04703 Report

Search the DGRC for FMO04703

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:47
Well:3
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04703.5prime Sequence

308 bp (308 high quality bases) assembled on 2008-08-08

> FMO04703.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTGTTGGGCG
ACATCAGGTTCAAGTTTTCGAACCGAAAGCACCAGATCCATAATCCAAAT
GTTTAAATCCGACGTCCTTGTCTTGGCCATCGTCTCCTGCTCTGCTGCCA
AGCCTGGACTGATTGGTGCGCCTTTGGCCTACACTGCTTACGTGGCTTAC
TCTCCTCTGGCTGTACTAATGGCCTACCCCTCGCCTTTGGCCTACTCCGC
ACCACTGAGCTACGCCGTTCCATCTGCACCGCTTCTTATCGCAAGCTTTC
TAGACCAT

FMO04703.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG18294-RA 507 CG18294-RA 14..163 58..207 345 82 Plus
CG12519-RB 600 CG12519-RB 12..161 58..207 345 82 Plus
CG12519-RA 507 CG12519-RA 12..161 58..207 345 82 Plus
CG12519-RB 600 CG12519-RB 357..445 202..290 340 92.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19477672..19477851 290..111 900 100 Minus
3L 28110227 3L 19423378..19423450 111..39 365 100 Minus
3L 28110227 3L 19477906..19477978 111..39 365 100 Minus
3L 28110227 3L 19472902..19472990 202..290 340 92.1 Plus
3L 28110227 3L 19487161..19487225 111..47 325 100 Minus
3L 28110227 3L 19486803..19486873 289..219 295 94.4 Minus
3L 28110227 3L 19467718..19467806 202..290 265 86.5 Plus
3L 28110227 3L 19423273..19423323 161..111 255 100 Minus
3L 28110227 3L 19471732..19471820 290..202 250 85.4 Minus
3L 28110227 3L 19476247..19476335 202..290 250 85.4 Plus
3L 28110227 3L 19422979..19423050 290..219 240 88.9 Minus
3L 28110227 3L 19467017..19467093 111..39 215 88.3 Minus
3L 28110227 3L 19472479..19472555 39..111 215 88.3 Plus
3L 28110227 3L 19475512..19475588 111..39 215 88.3 Minus
Blast to na_te.dros performed on 2014-11-28 20:05:13 has no hits.

FMO04703.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 23:01:52 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:10:30 Download gff for FMO04703.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32207-RA 486..745 36..298 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 20:37:46 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:46 Download gff for FMO04703.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 19477907..19477980 36..110 98   Minus
3L 19477666..19477851 111..298 97 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:01:52 Download gff for FMO04703.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19470766..19470951 111..298 97 <- Minus
arm_3L 19471007..19471080 36..110 98   Minus