FMO04703.5prime Sequence
308 bp (308 high quality bases) assembled on 2008-08-08
> FMO04703.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTGTTGGGCG
ACATCAGGTTCAAGTTTTCGAACCGAAAGCACCAGATCCATAATCCAAAT
GTTTAAATCCGACGTCCTTGTCTTGGCCATCGTCTCCTGCTCTGCTGCCA
AGCCTGGACTGATTGGTGCGCCTTTGGCCTACACTGCTTACGTGGCTTAC
TCTCCTCTGGCTGTACTAATGGCCTACCCCTCGCCTTTGGCCTACTCCGC
ACCACTGAGCTACGCCGTTCCATCTGCACCGCTTCTTATCGCAAGCTTTC
TAGACCAT
FMO04703.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18294-RA | 507 | CG18294-RA | 14..163 | 58..207 | 345 | 82 | Plus |
CG12519-RB | 600 | CG12519-RB | 12..161 | 58..207 | 345 | 82 | Plus |
CG12519-RA | 507 | CG12519-RA | 12..161 | 58..207 | 345 | 82 | Plus |
CG12519-RB | 600 | CG12519-RB | 357..445 | 202..290 | 340 | 92.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19477672..19477851 | 290..111 | 900 | 100 | Minus |
3L | 28110227 | 3L | 19423378..19423450 | 111..39 | 365 | 100 | Minus |
3L | 28110227 | 3L | 19477906..19477978 | 111..39 | 365 | 100 | Minus |
3L | 28110227 | 3L | 19472902..19472990 | 202..290 | 340 | 92.1 | Plus |
3L | 28110227 | 3L | 19487161..19487225 | 111..47 | 325 | 100 | Minus |
3L | 28110227 | 3L | 19486803..19486873 | 289..219 | 295 | 94.4 | Minus |
3L | 28110227 | 3L | 19467718..19467806 | 202..290 | 265 | 86.5 | Plus |
3L | 28110227 | 3L | 19423273..19423323 | 161..111 | 255 | 100 | Minus |
3L | 28110227 | 3L | 19471732..19471820 | 290..202 | 250 | 85.4 | Minus |
3L | 28110227 | 3L | 19476247..19476335 | 202..290 | 250 | 85.4 | Plus |
3L | 28110227 | 3L | 19422979..19423050 | 290..219 | 240 | 88.9 | Minus |
3L | 28110227 | 3L | 19467017..19467093 | 111..39 | 215 | 88.3 | Minus |
3L | 28110227 | 3L | 19472479..19472555 | 39..111 | 215 | 88.3 | Plus |
3L | 28110227 | 3L | 19475512..19475588 | 111..39 | 215 | 88.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:05:13 has no hits.
FMO04703.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 23:01:52 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-08 10:10:30 Download gff for
FMO04703.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32207-RA | 486..745 | 36..298 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 20:37:46 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:46 Download gff for
FMO04703.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19477907..19477980 | 36..110 | 98 | | Minus |
3L | 19477666..19477851 | 111..298 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:01:52 Download gff for
FMO04703.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19470766..19470951 | 111..298 | 97 | <- | Minus |
arm_3L | 19471007..19471080 | 36..110 | 98 | | Minus |