FMO04719.5prime Sequence
801 bp (801 high quality bases) assembled on 2008-08-04
> FMO04719.5prime
CGTATAGCATACATAATACGAAGTTATCAGTCGACATGGAATACCGGTGC
TTAAGTAGAAGTTCTGTCAAACACCTAACGGCTCTCTGCGTCCTCAGCAT
CGCACTCACCTGCGCAAACGCGGCATTGTGGCCAAGTTACAGCAGCGATG
ATGCGCCCCCCAGCCGCTGCAGCGGTGGGCGTGGCCTGAAGTACCTATCG
GGCGATGCGCTGACGGACTCGCTGGACTGCCTGGGTCCCAATAATGCGCC
ATATCCGAGCGCGGCCGTGGCGCGCACATTCTCCAACTGGAACGGAAACT
CGCGACGTGGCCGCCAGAGCAAATTGCCCAGCACACTGGACCCAGCCATA
ACCACCAGTGCTCTGCTGAGGGCCTACGACGAGGTGAACAACGAGGCCGT
CGGAAGCAGTCGCTATGGTCGTTCGCTGAAGAACGCCACGCCGGCGCAGC
AGTGCAAGAGCGAGACGCCGGCGCGCCTCTGCAAGACGCGCTACAATACC
ACGGCGCCCATGTACGGAGTGAGCCTCACCTCCGGCCAGCCGGTGACCAT
CGTCCAGAAGTTCCCCGATCTCCTGCAGCAGGTGGTCTTCGAAGTGTGCG
AATCCTCTGAGTGCGATGTGGTCCGCGGCGAGTGTACGCAAACCTATGTG
CCCTACCTGTTCCTGGTCATTCCGCTCGGCCCGGTGACGCTGACTGGCCA
GGATTACGTGCTGGTGGAGAGCGGATGCGTGTGCAAGCCCAAGTACTCGA
CGGGCGCCGCCCAGGAGCCGAACATGATACCGGCAAGCTTTCTAGACCAT
T
FMO04719.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17672-RA | 1483 | CG17672-RA | 331..1077 | 36..782 | 3735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13035032..13035219 | 72..259 | 940 | 100 | Plus |
| 3L | 28110227 | 3L | 13035584..13035768 | 417..601 | 925 | 100 | Plus |
| 3L | 28110227 | 3L | 13035918..13036098 | 602..782 | 905 | 100 | Plus |
| 3L | 28110227 | 3L | 13035293..13035454 | 258..419 | 810 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:14:23 has no hits.
FMO04719.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:57 Download gff for
FMO04719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17672-RA | 321..1077 | 28..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-04 11:01:59 Download gff for
FMO04719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17672-RA | 319..1075 | 28..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:31 Download gff for
FMO04719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17672-RA | 321..1077 | 28..782 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:31 Download gff for
FMO04719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13029282..13029327 | 28..71 | 91 | -> | Plus |
| 3L | 13035032..13035219 | 72..259 | 100 | -> | Plus |
| 3L | 13035295..13035452 | 260..417 | 100 | -> | Plus |
| 3L | 13035585..13035768 | 418..601 | 100 | -> | Plus |
| 3L | 13035918..13036098 | 602..782 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:57 Download gff for
FMO04719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13022382..13022427 | 28..71 | 91 | -> | Plus |
| arm_3L | 13028132..13028319 | 72..259 | 100 | -> | Plus |
| arm_3L | 13028395..13028552 | 260..417 | 100 | -> | Plus |
| arm_3L | 13028685..13028868 | 418..601 | 100 | -> | Plus |
| arm_3L | 13029018..13029198 | 602..782 | 100 | | Plus |
